| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4891 |
|---|
| Symbol | |
|---|
| ID | 8329089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5829982 |
|---|
| End bp | 5831325 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644945331 |
|---|
| Product | dihydroorotase, multifunctional complex type |
|---|
| Protein accession | YP_003102563 |
|---|
| Protein GI | 256378903 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0481803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAC TGCACGGGAT CCGGGTGCTC GGTGGCGAGC CGTCCGCGCT GGCGGTGCAC
GAGGGGGTGC TGGTCGAGCC GTTCTGCGCG CCCAGGATCG ACCTCGGCGG GCTGATCGCG
GTGCCCGCGC TGGTGGACCT GCGGGCGCAC CTGCGCGCGG CGGGCAGCGC GGACGTGGTC
GCCGCCGCGC ACGGCGGGTA CTCGGACGTC GTCGCGATGC CCAACCGCAC GCCCGTGACC
GACAGCGTCG CGCGGGTGCG GGCGCTCGGG CGCGGGGGTC AGGCGTGCCG GGTGCACCCG
GCGGGGGCGC TCACGGTCGG GCTCGCCGGG CAGCGGCTCG CGCCGATCGC GGAGATGGCC
AAGGCCGGGG TGCGGGTGTT CTCCGACGAC GCGAACTGCC TGGACGACGC CGGGCTGCTG
CGGCGGGCGA TGGTGGCGGC CAGGGCGGCG GGCGCGGTCG TGGCGCAGCA CGCGCAGTCC
GAGGCGCTGG CGGGCGGGGG GCAGGTCAAC GCCGGCGAGG CCGCGAAGCA GACCAAGCTG
CCGCCGTGGC CGGGGGTCGG CGAGGAGGCG GTGATCGCGC GGGACGTGCT GCTGGCCGCC
GAGACCGGGG CGGCGCTGCA CGTGAGCCAC GTGTCGACCG CGCGGTCGGT GGAGATCGTG
CGGTGGGCCA AGTCGCAGGG CTGGTCGGTG ACCGCCGAGG TCACGCCGCA CCACCTGCTG
CTCGACGACC GGGCGGTGCG CGGCGGGGAC ACCCGGTTCA AGGTGAACCC GCCGCTGCGG
TCGGCGTCCG ACGTGGAGGC GCTGCGGGAG GGGCTGCGGG ACGGCACGAT CGACGCGGTG
TCGACCGACC ACGCGCCGCA CCCGGCGAGC GCGAAGGCGC GGGACTGGTG CGCGGCGCCG
TTCGGGGCGG TCGGGCTGGA GACGGCGCTG GCCGTGGTCG CCGACGTGCT GGACGGGGAC
TGGGAGCTGA TCGCGCGGGT GATGTCCCAC GCGCCCGCGC GGATCGCCGG GCTGGCGAAC
GCGGGTCGGC CGCTGGAGCT GGGCGAGCCC GCGACGTTCG CGCTGGTCGA CCCGGACGGG
GAGTGGGAGG TGCGGCCGGA GGAGCTGCGG GGCGGGGTGG GGAACACGCC GTTCGCGGGG
CTGGCGTTCC GGCACCGGGT GGTGGCGACC GTGGTGGACG GCCGGGTGAC CGCCGACCCG
CGGGGGCTGC TCGGCGGGTT GGCGGAGCCC GAGGAGGAGG TCGGGGACGC CCCGGCCTGG
GACCTGCGGG CGGCTCGGGA GCTGCGGAGC TCGTGGGAGG AGCCGTCGGG CTCGGTCGAG
CGGCGGACGC CACCCGCGGC GTAG
|
|---|
| Protein sequence | MIELHGIRVL GGEPSALAVH EGVLVEPFCA PRIDLGGLIA VPALVDLRAH LRAAGSADVV
AAAHGGYSDV VAMPNRTPVT DSVARVRALG RGGQACRVHP AGALTVGLAG QRLAPIAEMA
KAGVRVFSDD ANCLDDAGLL RRAMVAARAA GAVVAQHAQS EALAGGGQVN AGEAAKQTKL
PPWPGVGEEA VIARDVLLAA ETGAALHVSH VSTARSVEIV RWAKSQGWSV TAEVTPHHLL
LDDRAVRGGD TRFKVNPPLR SASDVEALRE GLRDGTIDAV STDHAPHPAS AKARDWCAAP
FGAVGLETAL AVVADVLDGD WELIARVMSH APARIAGLAN AGRPLELGEP ATFALVDPDG
EWEVRPEELR GGVGNTPFAG LAFRHRVVAT VVDGRVTADP RGLLGGLAEP EEEVGDAPAW
DLRAARELRS SWEEPSGSVE RRTPPAA
|
|---|
| |