Gene Amir_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4881 
Symbol 
ID8329079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5820276 
End bp5820926 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content76% 
IMG OID644945321 
Producthypothetical protein 
Protein accessionYP_003102553 
Protein GI256378893 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.997672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA TCATCTCCGG CCTGACGGCG GCCGGGAAGA CCACGCTCTC CCACGCGCTG 
GCGCGGGCGT TCGACGTGCC GCGCTACTCG GCGTCGGCGG TGCTGCTCGA CGTGCTCGGT 
CGCGGGGAGC GCGAGTGGTC CCCGGAGGTC GACCTCGCGC GGGGCGACCC GGAGCTGGAG 
CGGGCGGTGG ACGCCGAGAT GGCCGGGTTG CTCGGCCGCG CGCCCGCCGG GGTGTTCGAC 
TCGTGGGGGC TGCCCTGGTA CTCGGCGGAA CCGGCGGTGC GGATCTGGCT GGAGTCGGAC 
GAGGGCAGCA GGGCGCGCAA GTGCCGCGTG TCGTACCTGG AGCGCGGGAG CCCGCGCGGG 
CGGGCCGAGT GCGCCGGGCT GCTGCGGGAC AAGGACGGGC TCAGCCGGGA GCTGTTCCTG 
GCGAACTGGG GGTTCGACCT GTTCACCGAC CGGACGCCGT TCGACGTGCT GGTGGACTGC 
TCGGCGCTGA TCCCGACGGC CACCAGGCGG GACGCCCGCG CGGGGGCGCG GGCGACGTTC 
CAGGCGGTGC TGGCGGCACT GGTCGAGCGC GGCGCGCGCC CCCGTGAGAG CGCGCCCACC 
GCGCGGGGGG CCAGGGGCGC GCGGGAGCCG GTGATCACCT GGCTGCGCTG A
 
Protein sequence
MKIIISGLTA AGKTTLSHAL ARAFDVPRYS ASAVLLDVLG RGEREWSPEV DLARGDPELE 
RAVDAEMAGL LGRAPAGVFD SWGLPWYSAE PAVRIWLESD EGSRARKCRV SYLERGSPRG 
RAECAGLLRD KDGLSRELFL ANWGFDLFTD RTPFDVLVDC SALIPTATRR DARAGARATF 
QAVLAALVER GARPRESAPT ARGARGAREP VITWLR