Gene Amir_4873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4873 
Symbol 
ID8329071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5813249 
End bp5813830 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content73% 
IMG OID644945313 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102545 
Protein GI256378885 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGAC GGGGCTCGTA CGCGAAGGGG CTGGCCAAGC GGGAGGAGAT CCTCACCACG 
GCGCTCGAAC TGGTCGCCCG CAACGGCTAC CGGCGCACCA CGGTGCGCGA GCTGGCCAAC 
GCGGTGGGCC TGAGCCAGGC CGGGCTGATG CACCACTTCG GGTCCAAGGA GGAGCTGTTC 
ACCGAGATCC TGCGGCGGCG CGACGAGGCC GACCGGGCGG AGTTCCTCGG CGACCCGGAG 
ACCACCGACC TGCCGGACGC GTACGTGCGG CTGGTGCGGC ACAACGCGGG CGTGCCGGGG 
TTGGTGCGGC TGTACAACCG GGTGTCGGCG GAGGCGGTGG AGCCGGAGCA CCCGTCGCAC 
GAGTACTTCG GCGAGCGCTA CCGGGCGCTG CGCGCGGACA CCGCCGAGGC GATCCGGCGG 
TTGCAGGCGG AGGGGCGGAT GCCCGCGGCG GCGGACCCGG ACAAGCTCGC GGTGCTGGTC 
ACGGCGCTGC TGGACGGGTT GCAGACGGCG TGGCTGTACG ACGGGGGCAC GGACATGGCC 
GAGCACGTGG CGCACTTCTG GGAGCTGGTG CGCGGGGAGT GA
 
Protein sequence
MTRRGSYAKG LAKREEILTT ALELVARNGY RRTTVRELAN AVGLSQAGLM HHFGSKEELF 
TEILRRRDEA DRAEFLGDPE TTDLPDAYVR LVRHNAGVPG LVRLYNRVSA EAVEPEHPSH 
EYFGERYRAL RADTAEAIRR LQAEGRMPAA ADPDKLAVLV TALLDGLQTA WLYDGGTDMA 
EHVAHFWELV RGE