| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4872 |
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| Symbol | |
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| ID | 8329070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5810924 |
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| End bp | 5813152 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945312 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003102544 |
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| Protein GI | 256378884 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.703586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG ACCAGCCCAC CGTGCCCGCG TCAGTGGCCG ACCAGGCCGC GCTCGGCAGC
GGCGCGGACA TGTGGACCAC GAAGGCGGTC GGCGACGTGC CGTCCCTCTT CGTCACCGAC
GGCCCGCACG GCCTGCGCAA GCAGACCGGC GACACCGACA ACCTCGGCAT CGGCGGCAGC
GTCCCCGCGA CCTGCTTCCC GCCCGCCGTC GGCCTCGCGC AGAGCTGGGA CGCCGACCTC
GTCGAGCGGG TCGGCCGGGC GCTGGGGGAG GAGTGCCAGG CCGAGGGCGT GTCCGTCCTG
CTGGGACCGG GCGTGAACAT CAAGCGCGAC CCGCGCTGCG GCCGCAACTT CGAGTACTAC
TCCGAGGACC CGCTGCTGTC CGGCGCGCTC GGCGCGGCCT GGGTGCGCGG CGTGCAGTCG
CAGGGCGTGG GCGCCTCGCT CAAGCACTAC GCGGCCAACA ACACCGAGAC CGACCGGATG
CGCTCCAGCT CCAACGTCGA CCCGCGCACC CTGCGCGAGG TGTACCTGCG GCCGTTCCAG
CGGGTCGTCG AGGACGCCCA GCCGTGGACG GTCATGTGCG CCTACAACCG GATCAACGGC
GTGTACGCGT CCGAGGACCG CTGGCTGCTC ACCGACGTGC TGCGCGGCGA GTGGGGCTTC
GAGGGCGCCG TGGTCAGCGA CTGGGGCGCG GTGCGCGACC GGGTGGCCGC CGTGTCGGCC
GGGCTCGACC TGGAGATGCC CGGCGGCGGC GACACCGACG CGGACGTCGT CGCGGCCGTC
GAGGCGGGCG GGCTGGACCC GGCCGTGGTG GAGCTGGCCG CGACGCGGGT CGCCGCGCTG
GCCGCCAAGG GCGTCGCAGG CCGCCGCTCC GACGTCGTGC TGGACGTCGA CGCGCACCAC
GCGCTGGCCC GCGAGGTCGC CGCGCGCTGC GTCGTGCTGC TCAAGAACGA CGGTGCCGTG
CTGCCCCTCG CCCCCGGCTC GTCCGTCGCC GTCATCGGCG CGTTCGCGCA GGCCCCGCGC
TTCCAGGGCG GCGGCAGCTC CCACGTGAAC CCCACCAGGG TGGACGTGCC GCTGGACGAG
ATCCGCCGCC ACGCCCCCTC GGCCACCTTC GCCGCGGGCT TCACCACCGA CGGCTCCGGC
GACGCGGCGG CCCTGCGCGC CGAGGCCGTC GCCGCCGCGG GCGCCGCCGA GTCCGCCGTG
CTGTTCCTGG GTTTGGCCGC CGACCAGGAG TCCGAGGGCT TCGACCGCGA GCACATCGAG
ATCCCCGCCG AGCAGGTCGA ACTGCTGGCC GCCGTGCTCC AGGCCCAGCC CCGCACCGCC
GTCGTGCTCT CCCACGGCGG CGCGCTGCGC CTGGCCCCCC TCGCGGGCGC GCCCGCCCTG
CTGGACGGCG CGCTGCTCGG CCAGGCGGGC GGCGCGGCCG TCGCGGACGT GCTGTTCGGC
GCGGTCAACC CGTCCGGCAG GCTCGCCGAG ACCGCGCCTA CCCGGCTGGA GGACACCCCG
GCGTTCCTGA ACTTCCCCGG CGAGCGCTCG CAGGTCTACT ACGGCGAGGG CCTGCACGTC
GGCTACCGCT GGTACGACGC CCGCGACGCG GCAGTCGGCT TCCCGTTCGG GCACGGCCTG
TCGTACACCA GCTTCGAGCA CCGGGACCTG ACCGTCTCCG CCTCCGAGGC CGGGATCACG
GCGTCGGTCG CGGTGGTCAA CACCGGCGAG CGGGCCGGGC GCGAGGTCGT GCAGTTCTAC
GTGTCGGTCC CCGGCTCGTC GGTGACGCGC CCCGTGCGCG AGCTGAAGGG CTTCGCCTCG
CTGGACCTGG AGCCCGGCGC CGAGGGCCGC GTCGAGGTCC TGCTGCGCGC CGCCGACCTG
TCCTACTGGG ACGTCGCGGC GGACCGGTGG GTGCTGGAGA GCGGCGAGTA CGAGGTGACC
GTCGGCGCGT CCAGCCGCGA CCTGCGCGCG TCCGCCACCG TCGCGGTGAC CGGCGACGAG
ACCCCGGTCC CGTTCACCCC GGAGTCGACC CTGGGCGAGG TCCTGGCCGA CGCCGCGGGC
GCCGAGGCGT TCGGCGGCCT GCTGACGGGC GTGTTCGGCT CGTCCGAGTC GTCCGAGGAC
GCGCTCGGCA TGGACATGGC GAAGATGATG GCGTCGATCC CGCTGGAGCG CTTCGTGAGC
CTGTCCGGCG GCAAGCTGAC CCGAGCCGGG CTGGCGGACA AGCTCGCCGA GGTGAACGCG
GCCAGGTGA
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| Protein sequence | MSTDQPTVPA SVADQAALGS GADMWTTKAV GDVPSLFVTD GPHGLRKQTG DTDNLGIGGS
VPATCFPPAV GLAQSWDADL VERVGRALGE ECQAEGVSVL LGPGVNIKRD PRCGRNFEYY
SEDPLLSGAL GAAWVRGVQS QGVGASLKHY AANNTETDRM RSSSNVDPRT LREVYLRPFQ
RVVEDAQPWT VMCAYNRING VYASEDRWLL TDVLRGEWGF EGAVVSDWGA VRDRVAAVSA
GLDLEMPGGG DTDADVVAAV EAGGLDPAVV ELAATRVAAL AAKGVAGRRS DVVLDVDAHH
ALAREVAARC VVLLKNDGAV LPLAPGSSVA VIGAFAQAPR FQGGGSSHVN PTRVDVPLDE
IRRHAPSATF AAGFTTDGSG DAAALRAEAV AAAGAAESAV LFLGLAADQE SEGFDREHIE
IPAEQVELLA AVLQAQPRTA VVLSHGGALR LAPLAGAPAL LDGALLGQAG GAAVADVLFG
AVNPSGRLAE TAPTRLEDTP AFLNFPGERS QVYYGEGLHV GYRWYDARDA AVGFPFGHGL
SYTSFEHRDL TVSASEAGIT ASVAVVNTGE RAGREVVQFY VSVPGSSVTR PVRELKGFAS
LDLEPGAEGR VEVLLRAADL SYWDVAADRW VLESGEYEVT VGASSRDLRA SATVAVTGDE
TPVPFTPEST LGEVLADAAG AEAFGGLLTG VFGSSESSED ALGMDMAKMM ASIPLERFVS
LSGGKLTRAG LADKLAEVNA AR
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