| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4852 |
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| Symbol | |
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| ID | 8329050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5773446 |
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| End bp | 5774150 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945293 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102525 |
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| Protein GI | 256378865 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGGG TAGCACTGGT GACCGGGGGC AACCGGGGGA TCGGACTGGC GACGGCGACC
GCCCTCGCCA AGGCAGGGAT GCGGGTGGCA GTCACCCACC GGGGTGGCGG GGCGCCCGCC
GAGCTGTTCG GCGTGCGCTG CGACGTCCGC GACGCCGAGC AGGTCGACCG GGCCTTCACC
GAGGTCGAGC GGGAGCTGGG CCCGGTCGGG GTGCTGGTGG CCAACGCGGG CGTCACCAGG
GACCGCCTGG TCGCCACGAT GGGCCCCGAG GACTTCGAGG ACGTGCTGCG CACCAACCTC
ACCGGCGCCT ACCTGGTGGC CAGGCGCGCG GTGCGCGGCA TGGTGCGCCA CCGCGGCGGT
CGCATCGTCC TGGTGGCCTC GGTCTCGGCG CTCACCGGCG CGCGCGGCCA GGCCAACTAC
ACCGCCGCCA AGGCCGGGAT GATCGGCTTC GCGCGCTCGG CGGCGCTGGA ACTGGCATCC
AGGGGCATCA CCGTCAACGT GGTCGCCCCC GGCTGGATCA GCACCGACAT GACCGACGAG
CTGCCCGAGG CCGCGAGGGT CGAAGCGGCG GCGCACGTGC CCATGCGCAG GTTCGGCGCC
CCCGAGGAGG CCGCTGCGGC GATCGCCTTC CTGGCGAGCG ACGCGGCCTC CTACGTCACC
GGCGTCGTGC TGCCGGTCGA CGGCGGCCTG TCCCTGGAGC GCTGA
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| Protein sequence | MTGVALVTGG NRGIGLATAT ALAKAGMRVA VTHRGGGAPA ELFGVRCDVR DAEQVDRAFT
EVERELGPVG VLVANAGVTR DRLVATMGPE DFEDVLRTNL TGAYLVARRA VRGMVRHRGG
RIVLVASVSA LTGARGQANY TAAKAGMIGF ARSAALELAS RGITVNVVAP GWISTDMTDE
LPEAARVEAA AHVPMRRFGA PEEAAAAIAF LASDAASYVT GVVLPVDGGL SLER
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