Gene Amir_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4823 
Symbol 
ID8329021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5742161 
End bp5742889 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID644945264 
Producthypothetical protein 
Protein accessionYP_003102496 
Protein GI256378836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000842276 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCCA CAACCCCGCA CACACCCGCG GAAAGGCACG TCGTGGAACC CACCCCGCTG 
ATCGTCGAAG ACCTGATGCT CCTGCTGCTG GACGACGAGA CCGGCACCAT GGCCGGCGCA 
GGCACCATGC ACTACTCCCT CGGCGGCGCA CTGCTGGTCG AACTGGCGCT GCGCGACCGG 
GTCGAGATCA TCGAGGGCAC CGAGGGCCTC GGTGGCCCCA AGGTCATCGC CACCGGTCCC 
CAGGACCTGG AAGACCCCCT CCTGCGCACC GCGCACGAGC AGATCGCCCA GCGGACCAGG 
CGAGCCCAGT CGGTCCTGCT GGAGATCGGC GCGGGCCTCT ACAAGCCGGT GATCAACCGC 
CTGATCGAGC GCGACCTGAT CCGCACCGAG AACAAGCGAG TCCTCGGCCT GTTCCGCACC 
ACGCGCCTCC CGAGCAACGC CCCGGCGCAC GAGGCGGACC TGCGCACCAA GATCCGCGCC 
ACCCTGGAGG ACGACCAGCC CGCAGACCCC CGAACCGGAG CCCTGATCGC CCTGCTCTCC 
GCGAGCGGCA CCCTCCCCGC CCTGCGCCCA CCCCTTCCCT GGTCGTCGAA GGTCGCCCAC 
CGCGCCAAGC ACATCGAAGC GGGCAACTGG GCCGCCTCAG CCGTGACCCT GGCAGTCGCC 
ACCGCCACCG CAGGCGCGGT AGCCGCAGCA GCGGTAGCTG CCACCACCGC GGTAGTAGCC 
ACCAGCTGA
 
Protein sequence
MVSTTPHTPA ERHVVEPTPL IVEDLMLLLL DDETGTMAGA GTMHYSLGGA LLVELALRDR 
VEIIEGTEGL GGPKVIATGP QDLEDPLLRT AHEQIAQRTR RAQSVLLEIG AGLYKPVINR 
LIERDLIRTE NKRVLGLFRT TRLPSNAPAH EADLRTKIRA TLEDDQPADP RTGALIALLS 
ASGTLPALRP PLPWSSKVAH RAKHIEAGNW AASAVTLAVA TATAGAVAAA AVAATTAVVA 
TS