Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4816 |
Symbol | |
ID | 8329014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5734002 |
End bp | 5735894 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644945257 |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003102489 |
Protein GI | 256378829 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.33051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCAC GCACACCGGC CCCTCCGCAC GGTGCGCGAC GGCCCTCGCC GTCGTCCGCG CTCGTCGTGC TCGCGATCGC GTTGATCAGC GGCGCGGCCG TGGTCGTCCT GGTCGTCGCG CTCACCGCGC CGCAGAGCGC GACGCTCGTG GCCTGGTTCG GCGGGAGCGC GGCGCTGCTG TTCGCCTGCG CGCTCGCCGC GTTCTCCCAC CAGCGCTCGG TGGCCGCCGC CAACGCCGCG CACGCCGACG CCGTGCTGGC CGAGGCCACC GACCTCGTCG ACCGGCTCAC CCCCGACGTG GTGGGCAGGC TCCGGGGCGG CGCCTCGGCG GAGAGCGCGC TCGCCCAGGT CGAGCAGCCG GAGAACGCCG ACCACCGGCG GCTGCTGCGC GTCCTCGCCG AGGAGATCGG GCACGGCGAG CGGATGCGCG CGGCCACCAT GGCCGCCTGC GCCAACGCGG CGGGCCGGGT GCAGGCGCTC ACCACCTCCA TGCTCGCCGA CCTGCGCGAG ATGGAGGAGC AGCACGGCGA GGACGTGCTC GGCGACCTGC TCAAGCTCGA CCACAGCACC GCGCAGGCCG GTCGGCTCGC GGACAGCATC GCGGTCCTCA CCGGCGCGCG CTCCGGCCGC CGCTGGACCA AGCCGATCGT CATGGAGAGC GTGCTGCGCG GCGCCATCGG CCGGGTCAGC GCCTACCAGC GGGTGCGCAC CCACTCGGTC AGCTCCGTCG CCGTCGTCGG GTACGCCGCC GAGGGCGTCA TGCACGCGCT CGCCGAGCTG ATCGACAACG CCACCAGCTT CTCGCCGCCC TCCGAGCAGG TGCACGTGTA CGTGGAGGAG GTGCACGCGG GCGTCGTCGT CACCATCGAG GACGGTGGCC TGGTCATGGG CGACCTGGCG CTGCGCCGCG CCGAGCAGGC GGTGTCCGCG CAGGCGCTCG ACCTGACCGC GCTGTCCGGC ACCCGGCTCG GGCTGGCCGT CGTCGGCGCG CTGGCCCGCA AGCACGGGCT GCGAGTGTCG TTCCGGCCGT CCTCGCGGGG TGGGACCGGC GTCGTGGTCA TGATCCCCCG GACGCTGATC ACCGAGGCCC GCAAGACCCC GGCCGCGTCC CGGCGGCGTG TGGAGCGCGA GCCCGCGCTG GCCGCCGCGC CCGCTGCCCT GCCCGCTGCC CTGCCCGCCG CGCCGGAGCG CTCGGCGGAC CGCTCGTCCG ACGGCCCGCC GGAGCCGCCC GCCCCGCGCC GCCGCAGGCC CCCGGCCGAG TCGGCCGACC GGTTCGACCC GACGGCCTGG GAGTCCCGCA GGTTCGAGAC GCCCCAGCGG TTCGAGGCGT CCTGGCGACC GGCGGAGCCG CCCGAGGACG AGCGGGCCGA CGACGACCGC TACGGCTCGC GCTCGGGCGA CATCCGCCCG GCCGAGCTGA CCAGCCTGAT CGGTTCCGGC GGGCAGTTCG AGCCCGCGCA GCTGCTCGGC ACCGGTGAGC GGTTCACCCC GCCCGCGCTC GACCCGCGCG ACCCCGGCCA GCGCGACCCG GATCTGCGCG ACCCGGACCC GCGTGACCTC GGCCAGCGCG ACCTGGACCA GCGCCCGGAC CACCACGACC CCGAACCGCC CCACCCCGAG GCCCGCTGGT CGCACGACGC CGTCGCGTCT GCCAGGGAGG ACGACGTCGA CCCGGTCGCG GAGGAGGACG CCGTGCCCGA GGAGCCGACC GCCCCGCCCG TGCTGCCCCG GCGCAAGCGC GGCAGCACGC TCGCCCCGGC CTCCGACCGC CCGGCCCGTC CCGCCGCGAA GCCCGCCGGG GCCGCGAGGC CGGACCTCGG CTCCCGGTTC GGCGCCTTCC GGGACGCCAG CCGGGGCAAG CGCCCCGCCG ACGACCCGCT CTGGCCGTCC TGA
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Protein sequence | MAPRTPAPPH GARRPSPSSA LVVLAIALIS GAAVVVLVVA LTAPQSATLV AWFGGSAALL FACALAAFSH QRSVAAANAA HADAVLAEAT DLVDRLTPDV VGRLRGGASA ESALAQVEQP ENADHRRLLR VLAEEIGHGE RMRAATMAAC ANAAGRVQAL TTSMLADLRE MEEQHGEDVL GDLLKLDHST AQAGRLADSI AVLTGARSGR RWTKPIVMES VLRGAIGRVS AYQRVRTHSV SSVAVVGYAA EGVMHALAEL IDNATSFSPP SEQVHVYVEE VHAGVVVTIE DGGLVMGDLA LRRAEQAVSA QALDLTALSG TRLGLAVVGA LARKHGLRVS FRPSSRGGTG VVVMIPRTLI TEARKTPAAS RRRVEREPAL AAAPAALPAA LPAAPERSAD RSSDGPPEPP APRRRRPPAE SADRFDPTAW ESRRFETPQR FEASWRPAEP PEDERADDDR YGSRSGDIRP AELTSLIGSG GQFEPAQLLG TGERFTPPAL DPRDPGQRDP DLRDPDPRDL GQRDLDQRPD HHDPEPPHPE ARWSHDAVAS AREDDVDPVA EEDAVPEEPT APPVLPRRKR GSTLAPASDR PARPAAKPAG AARPDLGSRF GAFRDASRGK RPADDPLWPS
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