Gene Amir_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4816 
Symbol 
ID8329014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5734002 
End bp5735894 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content77% 
IMG OID644945257 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003102489 
Protein GI256378829 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.33051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCAC GCACACCGGC CCCTCCGCAC GGTGCGCGAC GGCCCTCGCC GTCGTCCGCG 
CTCGTCGTGC TCGCGATCGC GTTGATCAGC GGCGCGGCCG TGGTCGTCCT GGTCGTCGCG
CTCACCGCGC CGCAGAGCGC GACGCTCGTG GCCTGGTTCG GCGGGAGCGC GGCGCTGCTG
TTCGCCTGCG CGCTCGCCGC GTTCTCCCAC CAGCGCTCGG TGGCCGCCGC CAACGCCGCG
CACGCCGACG CCGTGCTGGC CGAGGCCACC GACCTCGTCG ACCGGCTCAC CCCCGACGTG
GTGGGCAGGC TCCGGGGCGG CGCCTCGGCG GAGAGCGCGC TCGCCCAGGT CGAGCAGCCG
GAGAACGCCG ACCACCGGCG GCTGCTGCGC GTCCTCGCCG AGGAGATCGG GCACGGCGAG
CGGATGCGCG CGGCCACCAT GGCCGCCTGC GCCAACGCGG CGGGCCGGGT GCAGGCGCTC
ACCACCTCCA TGCTCGCCGA CCTGCGCGAG ATGGAGGAGC AGCACGGCGA GGACGTGCTC
GGCGACCTGC TCAAGCTCGA CCACAGCACC GCGCAGGCCG GTCGGCTCGC GGACAGCATC
GCGGTCCTCA CCGGCGCGCG CTCCGGCCGC CGCTGGACCA AGCCGATCGT CATGGAGAGC
GTGCTGCGCG GCGCCATCGG CCGGGTCAGC GCCTACCAGC GGGTGCGCAC CCACTCGGTC
AGCTCCGTCG CCGTCGTCGG GTACGCCGCC GAGGGCGTCA TGCACGCGCT CGCCGAGCTG
ATCGACAACG CCACCAGCTT CTCGCCGCCC TCCGAGCAGG TGCACGTGTA CGTGGAGGAG
GTGCACGCGG GCGTCGTCGT CACCATCGAG GACGGTGGCC TGGTCATGGG CGACCTGGCG
CTGCGCCGCG CCGAGCAGGC GGTGTCCGCG CAGGCGCTCG ACCTGACCGC GCTGTCCGGC
ACCCGGCTCG GGCTGGCCGT CGTCGGCGCG CTGGCCCGCA AGCACGGGCT GCGAGTGTCG
TTCCGGCCGT CCTCGCGGGG TGGGACCGGC GTCGTGGTCA TGATCCCCCG GACGCTGATC
ACCGAGGCCC GCAAGACCCC GGCCGCGTCC CGGCGGCGTG TGGAGCGCGA GCCCGCGCTG
GCCGCCGCGC CCGCTGCCCT GCCCGCTGCC CTGCCCGCCG CGCCGGAGCG CTCGGCGGAC
CGCTCGTCCG ACGGCCCGCC GGAGCCGCCC GCCCCGCGCC GCCGCAGGCC CCCGGCCGAG
TCGGCCGACC GGTTCGACCC GACGGCCTGG GAGTCCCGCA GGTTCGAGAC GCCCCAGCGG
TTCGAGGCGT CCTGGCGACC GGCGGAGCCG CCCGAGGACG AGCGGGCCGA CGACGACCGC
TACGGCTCGC GCTCGGGCGA CATCCGCCCG GCCGAGCTGA CCAGCCTGAT CGGTTCCGGC
GGGCAGTTCG AGCCCGCGCA GCTGCTCGGC ACCGGTGAGC GGTTCACCCC GCCCGCGCTC
GACCCGCGCG ACCCCGGCCA GCGCGACCCG GATCTGCGCG ACCCGGACCC GCGTGACCTC
GGCCAGCGCG ACCTGGACCA GCGCCCGGAC CACCACGACC CCGAACCGCC CCACCCCGAG
GCCCGCTGGT CGCACGACGC CGTCGCGTCT GCCAGGGAGG ACGACGTCGA CCCGGTCGCG
GAGGAGGACG CCGTGCCCGA GGAGCCGACC GCCCCGCCCG TGCTGCCCCG GCGCAAGCGC
GGCAGCACGC TCGCCCCGGC CTCCGACCGC CCGGCCCGTC CCGCCGCGAA GCCCGCCGGG
GCCGCGAGGC CGGACCTCGG CTCCCGGTTC GGCGCCTTCC GGGACGCCAG CCGGGGCAAG
CGCCCCGCCG ACGACCCGCT CTGGCCGTCC TGA
 
Protein sequence
MAPRTPAPPH GARRPSPSSA LVVLAIALIS GAAVVVLVVA LTAPQSATLV AWFGGSAALL 
FACALAAFSH QRSVAAANAA HADAVLAEAT DLVDRLTPDV VGRLRGGASA ESALAQVEQP
ENADHRRLLR VLAEEIGHGE RMRAATMAAC ANAAGRVQAL TTSMLADLRE MEEQHGEDVL
GDLLKLDHST AQAGRLADSI AVLTGARSGR RWTKPIVMES VLRGAIGRVS AYQRVRTHSV
SSVAVVGYAA EGVMHALAEL IDNATSFSPP SEQVHVYVEE VHAGVVVTIE DGGLVMGDLA
LRRAEQAVSA QALDLTALSG TRLGLAVVGA LARKHGLRVS FRPSSRGGTG VVVMIPRTLI
TEARKTPAAS RRRVEREPAL AAAPAALPAA LPAAPERSAD RSSDGPPEPP APRRRRPPAE
SADRFDPTAW ESRRFETPQR FEASWRPAEP PEDERADDDR YGSRSGDIRP AELTSLIGSG
GQFEPAQLLG TGERFTPPAL DPRDPGQRDP DLRDPDPRDL GQRDLDQRPD HHDPEPPHPE
ARWSHDAVAS AREDDVDPVA EEDAVPEEPT APPVLPRRKR GSTLAPASDR PARPAAKPAG
AARPDLGSRF GAFRDASRGK RPADDPLWPS