Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4806 |
Symbol | |
ID | 8329004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5721662 |
End bp | 5724019 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945247 |
Product | coagulation factor 5/8 type domain protein |
Protein accession | YP_003102479 |
Protein GI | 256378819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTGC GCACCGCCGT GCTCGTGGCG CTCACCGCGA CGGCCGTCCT GACCCCGCTC CCGGCCTCGG CCGCGCCCGC CGCGCCGTGG TACCCGCCGG TCGGTCCGGG CACCTCGGTG CTGGATCACC GGGCGAAGCT CGCCGGAGCG GTGGAACCGC AGTGGTACGA GGCGAACATC CCGTTCGTCG ACCTGCCCGA CCGGGAGATC GAGTCCACCT ACTACTACCG GTGGCGCACC TTCAAGGAAG CGCTGAAGTA CACCGGCCCG GACGACGGCT GGATCGTGTC GGAGTTCCTC GGCCCGGTCG GCTACTCCGC GCCCGGCGGC GGGATCGCGG CGGCGGCCGG GCACCACGTC TACGAGGGCC GCTGGCTGCG CGACCACCGC TACCTGGACG ACTACCTCGA CTACTGGCTG CGCGGCGGTG GCGCGGGACC CAAGCCCGCC ACCGAGTTCC TCAACCCCAA CACCACCGAC TGGGCGCACC AGTACTCGTT CTGGGCCGCC GACGCGGTCC TGGCCCGCGC GTCGGTGGAC GGGCGGCTGG AGCGGGCCGT GGCGCTGCTG CCCGAGCTGG AGCGCCAGTG GGCCGGGTGG GACGCGCAGA AGGACCGGGG GACGGGGCTG TACTGGCAGA CCCCGGTGTG GGACGCCATG GAGCACACGG CGAGCTCGTA CCAGAGCGAC GACCCCTACC ACGGCGGCGA GGGCTTCCGG CCCACGCTCA ACGCCTACCA GTACGGGGAC GCCAAGGCGA TCGCCGCGCT GCTGCGGGTG CGCGGCGACC GCGCCGCCGC CGAGCGCTAC GAGCGCGAGG CGAACGCCTT GAAAGACGCG CTGCGGCAAC GCTTGTGGGA CCGCGAGGAC GGCTTCTACA AGCACGTCAT GCGCGACGGC AACCCCGGTC GCGCGCCGCT GGCCGACCGC GAGCAGATCG GGTTCGTCCC CTGGTACTTC GGGATGCCCC CGGCCGAGCA CTCGTCCGCG TGGGCGCAGC TGACCGACCG GGCGGGCTTC GCCGCCGACT TCGGCCCGAC CACCGTGGAG CGCCGCAGCC CGTGGTACCT GCACGACGCG GAGAGGGGCT GCTGCCGCTG GTCCGGCCCG AGCTGGCCGT TCGCCACCAG CCAGACCCTC ACCGCGCTGG CCACCCTGCT CGTGGACTAC CCGGCGCAGT CCTTCGTGGA CAGAGGTGAC TACTACGACG TGCTGCGCGG CTACGCGCTG ACCCAGCGCA AGGGCGGGCA GCCGTACGTG GCCGAGGCGC ACCACCCCGA CCAGGACCGC TGGCTCTACG ACGGCCGGGG GCACAGCGAG GACTACAACC ACTCCACGTT CACCGACCTC GTGCTCTCCG GACTGCTCGG AATCCGCCCC CAGCAAGGGG ATTCGGTGCG GATCGCCCCG CTGGTCCCGG ACGGCTGGGA CCACTTCGCG GCGGAGAACG TGCCGTACCA CGGCCGGAAC CTGACCGTGC TGTGGGACCG GGACGGCAGC GCCTACGGCA GGGGCGCCGG GCTGCGGGTG TTCGTCGACG GCGTGCAGGC GCACGCGCAG CGCGACCTGG GCCCGGTGCG CGTCCCGCTG CGGCGCGGCG CTCCCGCCGA GCTGCCGGGC CTGGTGGACG ACCTGGCGAA CCCGTCCGGG ACGGGCTTCC CCGCCGCCAC CGCCTCGCAC ACCTGGCACG CCGACAGCCC CGCCGACGCG ATCGACGGCC AGGACTTCCA CCTGGACGTC CCGTCGACCC GCTGGACCTC GTACGGCAGC CCCGACCGCG CCGACTGGCT GGCGGTCGAC CTCGGCGCGG CGACGGTGGT GTCGGACGTG CGGATCTCGT TCTACGACGA CGGCGGGGGA GTGCGCACGC CCGACGCGTT CGCCCTGGAG CGGCGGGACG CCTCCGGCGC GTGGGTGGAG ATACCCGGCC AGCGCCGGAC GCCGGCCGTG CCGGAACGCG GGCGGGTCAA CCGGGTCGTG GTCGACCCGC CGGTGCGGGT GGACGCGCTG CGGCTGCGCG CCACCAGGTC CGACGGCGGC GCGGTGGGCG TGACGGCCTG GCAGTCCTGG CGGCGGGAGG ACGACCGGGT CTCCGCCGCG CTGCCCGGCC TGCGGGACGG GGTGGTCCCG GTGCGGGCGG GCGCCGCGAC GGAGGTGGGC GCGACCGTGC GCGGTCCGGC GCGACCGGAG CTGCTGGCCC CGGCGGGTTG GGCGGTCTCG CCGCTGCCGC GCCGCCGGGC GAGTTCCGCT GGCGGGTGGG CGCGCGGTTC GGCGAGCCCG CGCCCGAGCT GGTGGCGGAC GGCGGGCTCA CCGCGAGCGC GTCCCGCCAG TCGCCGGCGG TGCTGGTCGC CCCGGTGA
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Protein sequence | MRLRTAVLVA LTATAVLTPL PASAAPAAPW YPPVGPGTSV LDHRAKLAGA VEPQWYEANI PFVDLPDREI ESTYYYRWRT FKEALKYTGP DDGWIVSEFL GPVGYSAPGG GIAAAAGHHV YEGRWLRDHR YLDDYLDYWL RGGGAGPKPA TEFLNPNTTD WAHQYSFWAA DAVLARASVD GRLERAVALL PELERQWAGW DAQKDRGTGL YWQTPVWDAM EHTASSYQSD DPYHGGEGFR PTLNAYQYGD AKAIAALLRV RGDRAAAERY EREANALKDA LRQRLWDRED GFYKHVMRDG NPGRAPLADR EQIGFVPWYF GMPPAEHSSA WAQLTDRAGF AADFGPTTVE RRSPWYLHDA ERGCCRWSGP SWPFATSQTL TALATLLVDY PAQSFVDRGD YYDVLRGYAL TQRKGGQPYV AEAHHPDQDR WLYDGRGHSE DYNHSTFTDL VLSGLLGIRP QQGDSVRIAP LVPDGWDHFA AENVPYHGRN LTVLWDRDGS AYGRGAGLRV FVDGVQAHAQ RDLGPVRVPL RRGAPAELPG LVDDLANPSG TGFPAATASH TWHADSPADA IDGQDFHLDV PSTRWTSYGS PDRADWLAVD LGAATVVSDV RISFYDDGGG VRTPDAFALE RRDASGAWVE IPGQRRTPAV PERGRVNRVV VDPPVRVDAL RLRATRSDGG AVGVTAWQSW RREDDRVSAA LPGLRDGVVP VRAGAATEVG ATVRGPARPE LLAPAGWAVS PLPRRRASSA GGWARGSASP RPSWWRTAGS PRARPASRRR CWSPR
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