| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4800 |
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| Symbol | |
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| ID | 8328998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5714472 |
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| End bp | 5717240 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644945241 |
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| Product | transcriptional regulator, winged helix family |
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| Protein accession | YP_003102473 |
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| Protein GI | 256378813 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTCG TGGTGCTGGG GCCACTGCTC GTGACCGCCG ACGACGGCGC GGAGATCGAG
GTCCGCGGCG CCCGCCTGCG CGCGCTCCTC TCCCGCCTCG CCGCCGATCC CGGCCAGGTC
GTGCCCGTCG CCGGGCTGGT CGACGCGCTC TGGCCCGACG ACCCGCCCGT CGACGCCGCC
GCCTCCCTCC AGTCCCTCGT CTCCCGGCTG CGCAAGGCCC TCGGCCCCAC CGCCGTCTCC
TCGCACCCCA CCGGTTACCG CCTCGACGTC CCCACCGACA CCGCCGACGT CCGGCGGCGC
CTGGCCGACC ACGACCACGC CTCCGCGCTC GCCCTCTGGC GCGGCCCCGC GTTCCCCGAC
CTCCCGGCCG CGATCACCGC GCATTGGGCC GACCTGCGCC TCACCGCCGC CGAGCGGCAC
CCCGCGCCGG ACCCCGCCCT GCTGGCGGAC CTCGTCGCCG AGCACCCCGC CCGCGAGGGG
CTGCGCGCCA AGCTGGTCCG CGCCCTGCAC GCCCGTGGCA GGCAGACCGA GGCGCTCACC
GCGTACGAGC AGGCCCGCAG CTGGCTCGCC GACGAGCTGG GCGCCGACCC CGGCCCCGAC
CTGCGCGCGG CGCACCTGGC CGCGCTGCGC CCCGCCCAGC GCGGCGCCCC GCCGGTCCCG
CCCACCCCGC TGGTCGGCCG CGCGGACGAC CTCACCCGGC TCGTCGACCT GACCGCCCGC
GCCCGCCTGG TCACCGTCAC CGGCTTCGGC GGCATGGGCA AGACCCGGCT CGCCCAGGCC
GTCGCCGCCC GCGGCGCGCA CCCCGTCCTG TGGGTGCCGC TGGAGTCCGC CTCCGACCCG
GTCGACGCCC TCCGGCACGC CGTGGCGCGG GGCGACACCA CCGCCGCCGT CCTCGGCGAG
CGCCCCACCG CCGACCCGGT CGACCTGCTG CGCGCCGCCA CCTGCCTGCT GGTGCTGGAC
AACTGCGAGC ACCTGCTCGA CCCCACCTCG GAGCTGGTCA CCCGGCTGCT CGCCGCCGCA
CCGGACGTGC GCGTGCTGAC CACCAGCCGC GAGGCGCTGG GCGTGCCCGG CGAGGCGCTG
CACCCGCTGG CCCCGCTGGA CGAGGACACC TCGGTCGAGC TGTTCACCGC CCGCGCCACC
GCCGCCCGCC CCGACTTCGT GGTGACCGAC GACGCCCGCC GGGTGTGCCG CGCGCTCGAC
GGCATCCCGC TCGCGCTGGA GCTGGCCGCC GCCCGCCTGC GCTCCCTCAC CACCGCCCAG
CTCGCCGACC GCGTCGACCA GCGCCTGCGG CTGCTCGACC GGGGGGCCAG GACCGCCGCC
GCCCGCCACC GCACGCTGCG CGCCGTCGTC GACTGGAGCT GGGAGCTGCT CACCGGTCCC
GAGCGCGAGC TGCTCCGCGT CCTGGCCGCG TTCCCCGGCG GCGCGGCGCT GGACGCGGTC
GCCGAGGTGT CCGAAGTGGA CGAGTGGGTC GCGCTGGACC TGGTGTCCTC GCTGGTGGAC
AAGTCCCTGG TGGTCGCCGA CGGCGAGCGG TACCGGCTGC TGGAGACCGT GCGCGAGTAC
GCGGCGGGCG TCCCCGGACC CGACCACCGG CCCCGGCACG CCGCGCACTT CCTGGCGCTC
GCCGAGACCG CCGAACCGCA CCTGCGCACC GGCGGCCAGC TGCCCTGGCT GGCCAGGCTC
GACGCCGAGC AGGCCAACCT GGACGCCGCG CTGTCCTGGC TCGTGCAGAC CCGCGACGGC
CCGCGCGCCC TGCGCATGGT CGCCGCCCGC GCCTGGTGGT GGGTCAACGC GCGCGCCCGC
CCCGCCGAGG CCCGCGCGTG GGCGTCGGCC GTGGAGGGGT TCGCGGTCTC CCCGGTCACC
CGGCTGCTCG CGGCGGGCGT GATCGCCGAC GAGCTGCGGG AGCGCGCGAG CCCGCTGCTG
ATGTGCCTGG TCGACGCGGT GCGGTGGTGG CACTCGGCGG GCGCTGACCT GCTCGGCGCG
CGGATGCGCG AGTCCGCCGA CCCGTGGTCG CGCGGGATCG GCGTGCTGGT GCGGGGGCTG
GCCGCCTACG AGCTGAGCGC GGGGCGCACC GAGGAGGCCG AGCGGTGGTA CCGGCGGGCG
CTGCGCGAGC TGACCGAGGT CGGCGACCGG TGGGCGATCG CGCTCGCGGG GGTGTCCCTG
TCGCAGCTGC TGGGCAACCG GGGCGCGCAC GCGGAGGCGC TGGCGGTGCT GGAGGAGGCG
CGGCGGGCGT CCGCGGCGTT CGGCGCGGTG GAGGACGTCC TGGTGCCGCT GGCCCCGCTG
GTGCAGTTCG CCAGGCTGCG CGTGCGCACC GGTGATCTCG TCGCGGCGCA GCGGGAGCTG
GACCGGGCGC ACGCCGTGGC CACCCGTCGC GCCGACCCGC TGGAGCTGGC CCGCGTCCAC
CTCGCGTCGG CCGAGCTGGC GCACGCGCGC GGCGAGCGGG CCGAGGCGGT CGACCGGTTC
CGCGCCGCGC TCGCCACCGC CCCGCCCGAC TCCCCGCCGC AGTTCCGCTC GACCATCCAC
AGTGGACTCG CCCGCGCGCT CCCTGCCGCG GAGGCCGGTC CGGAGCACGG CCGGGCGCTC
GACGAGGCCC GCCGCTCCCC GGACGGGCCC GCGATCGCGC TCGCCTGGGA GGCGAGGGCG
CTGTGGCTGC GGGAGGTCGG CGACCGGGAC GGCGCCGCCG CCGCGCTGGA CGAGGCCGAG
CGGGCGCGGG GCGTGCTCGC GCTCGCCGAC CCGGAGATCG CCGACCTCGC CCGCTGGGCC
GGGCGCTGA
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| Protein sequence | MRVVVLGPLL VTADDGAEIE VRGARLRALL SRLAADPGQV VPVAGLVDAL WPDDPPVDAA
ASLQSLVSRL RKALGPTAVS SHPTGYRLDV PTDTADVRRR LADHDHASAL ALWRGPAFPD
LPAAITAHWA DLRLTAAERH PAPDPALLAD LVAEHPAREG LRAKLVRALH ARGRQTEALT
AYEQARSWLA DELGADPGPD LRAAHLAALR PAQRGAPPVP PTPLVGRADD LTRLVDLTAR
ARLVTVTGFG GMGKTRLAQA VAARGAHPVL WVPLESASDP VDALRHAVAR GDTTAAVLGE
RPTADPVDLL RAATCLLVLD NCEHLLDPTS ELVTRLLAAA PDVRVLTTSR EALGVPGEAL
HPLAPLDEDT SVELFTARAT AARPDFVVTD DARRVCRALD GIPLALELAA ARLRSLTTAQ
LADRVDQRLR LLDRGARTAA ARHRTLRAVV DWSWELLTGP ERELLRVLAA FPGGAALDAV
AEVSEVDEWV ALDLVSSLVD KSLVVADGER YRLLETVREY AAGVPGPDHR PRHAAHFLAL
AETAEPHLRT GGQLPWLARL DAEQANLDAA LSWLVQTRDG PRALRMVAAR AWWWVNARAR
PAEARAWASA VEGFAVSPVT RLLAAGVIAD ELRERASPLL MCLVDAVRWW HSAGADLLGA
RMRESADPWS RGIGVLVRGL AAYELSAGRT EEAERWYRRA LRELTEVGDR WAIALAGVSL
SQLLGNRGAH AEALAVLEEA RRASAAFGAV EDVLVPLAPL VQFARLRVRT GDLVAAQREL
DRAHAVATRR ADPLELARVH LASAELAHAR GERAEAVDRF RAALATAPPD SPPQFRSTIH
SGLARALPAA EAGPEHGRAL DEARRSPDGP AIALAWEARA LWLREVGDRD GAAAALDEAE
RARGVLALAD PEIADLARWA GR
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