Gene Amir_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4796 
Symbol 
ID8328994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5710939 
End bp5712210 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content75% 
IMG OID644945238 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_003102470 
Protein GI256378810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCACGA CCACTGAGAC CCCCTCCGAC CAGCGCAGGC TCCCCACCTT CCCGACGTCC 
TGCGCCGCGC CCGTCCCCCG GCCCGAGGAG CCGGTGCGGG TCGTCCCGCT CGCCGTCGCC
TCGCTGATCG CGGTGGCGCT CACCGGCTAC GTGTGGACCG CGCACGGCGC GAAGTCCGGC
GTGCTGCTCC TGCTCGGCCT CGGGCTGGGC CTGGCCCTGT TCCACTCGCG GTTCGGGTTC
ACCTCGGCGT GGCGGCAGCT GGTCGCGGTC GGCAACGGCG CGGGCGTGCG GGCGCACTCG
CTGCTGCTCG GCACGGCGGC CACGCTCGTC GCGCTGATCG TGTCCACCGG GTCCGGGCTG
TTCGGGTCGG CGCCCAGGGC GAGCGCGGGG CCGATCGGGC TGGCGCTGTT CGTGGGCGCG
CTGCTGTTCG CGGTCGGGAT GCAGCTGGGC GGCGCGTGCG CGTCCGGCAC GCTGTTCGCG
GTGGGCTCGG GCCAGTCCAC GATCCTGCTG ACGCTGTTCG GCTTCATCGT CGGCTCGGTG
GTCTACACCG CCGCGTTCCC GGTGTTCGAC GGCTGGCCCT CGGTGCCGGG CGTGCTGCTG
TCGGACCACG TGGGCTGGTT CGGCTCGTGG GCGCTGACGA TCGCGGCGCT GGGGCTGATC
GTGCTGGCGA CCTGGTTCGT GCAGAAGCGC CGGAACCCGC CGCCCGCGGA CGTGGCGCCG
ACCGCGACCG GCCTGGCGCG GGTGCTGCGC GGCTCGTGGC CGCTCCTGGT CGGCGCGGTC
GTGCTGGGCG TGCTGGCGGG CGCGGTGTTC CTGGTGTCGG GCGGGATCTG GGGCGTGACG
TTCGCGTTCG CCCTGTGGGG CGCGAAGTTC CTGCAGCTGA TCGGGCTGCA CCCGGAGACG
TGGGAGTTCT GGCGGAGCGC GTCGAACGCC AAGGCGCTGG CCGGGTCGGT GTGGACGGAC
AAGACCACGC TGACCGACGT GGGCATCATG ATCGGCGCGG CGATCGCGGC GGCCCTGGCG
GGCGCGTGGA AGCTGCACAC CTCGATCCCG TGGCGCACGG CGCTCGCGGC GGTGCTGGGC
GGGGTCCTGA TGGGCGTGGG CGCGCGGCTG GCCGGTGGCT GCAACATCGG CGCGTACCTG
GGCGGGATCT CCACGGGCAG CCTGCACGGG TGGCTGTGGG GCCTGTTCGC GCTGGGCGGC
ACGTGGATCG GGCTGCGGCT GCGACCGCTG TTCGGGCTGG GCGTGCCGAA GGCCGCGGAC
AGCGTCTGCT GA
 
Protein sequence
MSTTTETPSD QRRLPTFPTS CAAPVPRPEE PVRVVPLAVA SLIAVALTGY VWTAHGAKSG 
VLLLLGLGLG LALFHSRFGF TSAWRQLVAV GNGAGVRAHS LLLGTAATLV ALIVSTGSGL
FGSAPRASAG PIGLALFVGA LLFAVGMQLG GACASGTLFA VGSGQSTILL TLFGFIVGSV
VYTAAFPVFD GWPSVPGVLL SDHVGWFGSW ALTIAALGLI VLATWFVQKR RNPPPADVAP
TATGLARVLR GSWPLLVGAV VLGVLAGAVF LVSGGIWGVT FAFALWGAKF LQLIGLHPET
WEFWRSASNA KALAGSVWTD KTTLTDVGIM IGAAIAAALA GAWKLHTSIP WRTALAAVLG
GVLMGVGARL AGGCNIGAYL GGISTGSLHG WLWGLFALGG TWIGLRLRPL FGLGVPKAAD
SVC