| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4795 |
|---|
| Symbol | |
|---|
| ID | 8328993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5709954 |
|---|
| End bp | 5710847 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644945237 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003102469 |
|---|
| Protein GI | 256378809 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTT TCGTCACCGG GGCGTCGGGG TGGATCGGCT CCGCCGTCGT GGACGAGCTG
ATCGCGGACG GGCACGAGGT CGTCGGGCTG GCCAGGTCCG ACGCGTCCGC CGCGAGGCTG
GAGGCCAGGG GCGCGCTCGC GCGGCGGGGC GACCTGGACG ACCACCACGG GCTGCGCACG
GGCGCGCTGG AGGCCGACGC CGTCGTCCAC CTGGCCAACA AGCACGACTT CGGGAACCTG
GCGGCCACCA ACGCCACCGA GCGCGCCGCC ACCGCGACCC TCGGCGCGGC GCTGGAGGGC
ACCGGCAAGC CGTTCCTGCT GGCCTCCGGG CTCGCCGAGG TCGCGCCGGG CAGGCTCGCC
ACCGAGCACG ACCCGTCCAC GTTCCACGGC CCGGACTCGG CGCGCGGCGG CAGCGAGAAC
CTGCTGCTGG AGCACGTCGC GCGGGGCGTG CACGCGGTCG CGGTGCGGTT CTCGCCGACC
ACGCACGGCG TCGGCGACCG GGGGTTCGTC GACGTGCTCG CCTCGGTGGC GCGCGCGAAG
GGCGTGTCCG GCCACCCCGG AGACGGGTCG AACCGCTGGG CGGCGGTGCA CGTGCGGGAC
GCGGCGCGGG TGGTCGCGCT CGGGCTGACC AAGGCGCCTG CCGGGTCGCG GCTGCACGCC
GTGGCCGAGG AGGGGATCAC CACGCGGGAG ATCGCCGAGG CGCTCGGGGC CGCGCTGGAC
CTGCCGGTCG CGTCGGTCGC GCCGCGGGAC GTGGCGGGGC ACTTCGGCTG GATCGGCGGG
TTCTTCGCGC TGGACATGGC CGCCTCCAGC GCGCTCACCC GCGAGTCGCT CGGCTGGGAG
CCGACCGGGC CGACCCTGCT GGCGGACATC GCGGCGGGCG CGTACACCCG CTGA
|
|---|
| Protein sequence | MRVFVTGASG WIGSAVVDEL IADGHEVVGL ARSDASAARL EARGALARRG DLDDHHGLRT
GALEADAVVH LANKHDFGNL AATNATERAA TATLGAALEG TGKPFLLASG LAEVAPGRLA
TEHDPSTFHG PDSARGGSEN LLLEHVARGV HAVAVRFSPT THGVGDRGFV DVLASVARAK
GVSGHPGDGS NRWAAVHVRD AARVVALGLT KAPAGSRLHA VAEEGITTRE IAEALGAALD
LPVASVAPRD VAGHFGWIGG FFALDMAASS ALTRESLGWE PTGPTLLADI AAGAYTR
|
|---|
| |