Gene Amir_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4777 
Symbol 
ID8328975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5691749 
End bp5692993 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content77% 
IMG OID644945219 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003102451 
Protein GI256378791 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.881248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCA CCACCGAAGA CCTGCGAGGG GACGCGCCGC CCCGCGGTCC GCTGCTGCTC 
GACCCCGCCT TCCTGAGGCT GTGGTGCGGC GCCACGGCGT CCGGCCTGGC CACCTGGAGC
CTGCCGTTCG TGCTGGGCCT CGCGGTCCTG GAGCGCTCGA TCACCCCGAC CGTCCTCGGG
CTGGTGCTCG CCGCCCGCAC GGTCGGCTTC CTGCTCGCCG TGCCCGCGGC GGGCGTGCTG
GCCGACCGGT ACTCGCGCCG CGCGGTCGTG CTGTGGGCCG GACTGGCGGC GGCGGTGGCC
GCGCCGGTGA TCGCCTACGG GCTCGGCCGC TCCACGCTCG TCATGGCGGT GGCCGCGCTC
GTCGCGGGCG CGGGCCAGGG CGCGTGCCGA CCGGCCTTCC AGGCGCTGAC GGCCGAGGTG
GTCCTGGCCG CCGACCGCAG GCGGGCCAAC GCGGCGATGA CCGTGGCCGT CCGGGTGACC
TCGCTGGTCG CGCCGGGGCT CACCGCGCTG CTGGCGACCG TGGCCGGGGT GTGGGCGCTG
CTCATCGCCA CCGGCGCGCT GTGGCTGGTC GCGGGTCTGC TGCCCCCGGC CGGGAAGCCG
TCCGCGCCCA CGTCCGGGAC CCGCTTCGCG CCCGTGGCGG AGTTCCTGGA GGGCGTGCGC
GAGGCGCGGC GGCACCCGTG GTTCCTGGCG GGCCTTGGCG CGCTCACGGC CGTCATCGCC
ACCGGCTACT CCGCGACCGG CGTGGCGCTG CCGCTGGTGA GCCGGGACGA CTACGGCACC
GAGTTCGTGC TGGCGGCGGC GACCACCGGC TACACCGTGG GCGCGCTGCT CGGCGGCCTG
CTGCTGAGCC GCTGGTCGCC GCGCGCGCCG GGGTGGACCG CGCTGCTGGG CCTCGGCTGC
TACGGCCTGG CCCCGCTGAG CCTGGTCGTG CCGACCTCGC CGCTGGTGGT GATCGCGGCG
TACGTGGTCG CGGGGGTGGG CATCGAGCTG TTCAACGTCC CGTGGTTCAC CGCGACGCAG
CACGAGGTGG CGCCGGACAA GCTGGCGCGG GTGTCCTCCT TGGACTTCCT GCTGTCCTAC
GGCCTGGCCC CCCTGGGGTT GTCGGTGATG GCCCCGCTGA TCGAGCACGT GGGCGTGGCG
CCGGTGATGG TGGGGTGCGC GGTGATCTGC TTCGCGGCCC CGGCGCTCGC CGCGCTGCAC
CCGTCGTCGC GCTCGTTCGC CACCGGGAGC GCCGTCCGGG GCTGA
 
Protein sequence
MTPTTEDLRG DAPPRGPLLL DPAFLRLWCG ATASGLATWS LPFVLGLAVL ERSITPTVLG 
LVLAARTVGF LLAVPAAGVL ADRYSRRAVV LWAGLAAAVA APVIAYGLGR STLVMAVAAL
VAGAGQGACR PAFQALTAEV VLAADRRRAN AAMTVAVRVT SLVAPGLTAL LATVAGVWAL
LIATGALWLV AGLLPPAGKP SAPTSGTRFA PVAEFLEGVR EARRHPWFLA GLGALTAVIA
TGYSATGVAL PLVSRDDYGT EFVLAAATTG YTVGALLGGL LLSRWSPRAP GWTALLGLGC
YGLAPLSLVV PTSPLVVIAA YVVAGVGIEL FNVPWFTATQ HEVAPDKLAR VSSLDFLLSY
GLAPLGLSVM APLIEHVGVA PVMVGCAVIC FAAPALAALH PSSRSFATGS AVRG