Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4777 |
Symbol | |
ID | 8328975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5691749 |
End bp | 5692993 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644945219 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003102451 |
Protein GI | 256378791 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.881248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCA CCACCGAAGA CCTGCGAGGG GACGCGCCGC CCCGCGGTCC GCTGCTGCTC GACCCCGCCT TCCTGAGGCT GTGGTGCGGC GCCACGGCGT CCGGCCTGGC CACCTGGAGC CTGCCGTTCG TGCTGGGCCT CGCGGTCCTG GAGCGCTCGA TCACCCCGAC CGTCCTCGGG CTGGTGCTCG CCGCCCGCAC GGTCGGCTTC CTGCTCGCCG TGCCCGCGGC GGGCGTGCTG GCCGACCGGT ACTCGCGCCG CGCGGTCGTG CTGTGGGCCG GACTGGCGGC GGCGGTGGCC GCGCCGGTGA TCGCCTACGG GCTCGGCCGC TCCACGCTCG TCATGGCGGT GGCCGCGCTC GTCGCGGGCG CGGGCCAGGG CGCGTGCCGA CCGGCCTTCC AGGCGCTGAC GGCCGAGGTG GTCCTGGCCG CCGACCGCAG GCGGGCCAAC GCGGCGATGA CCGTGGCCGT CCGGGTGACC TCGCTGGTCG CGCCGGGGCT CACCGCGCTG CTGGCGACCG TGGCCGGGGT GTGGGCGCTG CTCATCGCCA CCGGCGCGCT GTGGCTGGTC GCGGGTCTGC TGCCCCCGGC CGGGAAGCCG TCCGCGCCCA CGTCCGGGAC CCGCTTCGCG CCCGTGGCGG AGTTCCTGGA GGGCGTGCGC GAGGCGCGGC GGCACCCGTG GTTCCTGGCG GGCCTTGGCG CGCTCACGGC CGTCATCGCC ACCGGCTACT CCGCGACCGG CGTGGCGCTG CCGCTGGTGA GCCGGGACGA CTACGGCACC GAGTTCGTGC TGGCGGCGGC GACCACCGGC TACACCGTGG GCGCGCTGCT CGGCGGCCTG CTGCTGAGCC GCTGGTCGCC GCGCGCGCCG GGGTGGACCG CGCTGCTGGG CCTCGGCTGC TACGGCCTGG CCCCGCTGAG CCTGGTCGTG CCGACCTCGC CGCTGGTGGT GATCGCGGCG TACGTGGTCG CGGGGGTGGG CATCGAGCTG TTCAACGTCC CGTGGTTCAC CGCGACGCAG CACGAGGTGG CGCCGGACAA GCTGGCGCGG GTGTCCTCCT TGGACTTCCT GCTGTCCTAC GGCCTGGCCC CCCTGGGGTT GTCGGTGATG GCCCCGCTGA TCGAGCACGT GGGCGTGGCG CCGGTGATGG TGGGGTGCGC GGTGATCTGC TTCGCGGCCC CGGCGCTCGC CGCGCTGCAC CCGTCGTCGC GCTCGTTCGC CACCGGGAGC GCCGTCCGGG GCTGA
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Protein sequence | MTPTTEDLRG DAPPRGPLLL DPAFLRLWCG ATASGLATWS LPFVLGLAVL ERSITPTVLG LVLAARTVGF LLAVPAAGVL ADRYSRRAVV LWAGLAAAVA APVIAYGLGR STLVMAVAAL VAGAGQGACR PAFQALTAEV VLAADRRRAN AAMTVAVRVT SLVAPGLTAL LATVAGVWAL LIATGALWLV AGLLPPAGKP SAPTSGTRFA PVAEFLEGVR EARRHPWFLA GLGALTAVIA TGYSATGVAL PLVSRDDYGT EFVLAAATTG YTVGALLGGL LLSRWSPRAP GWTALLGLGC YGLAPLSLVV PTSPLVVIAA YVVAGVGIEL FNVPWFTATQ HEVAPDKLAR VSSLDFLLSY GLAPLGLSVM APLIEHVGVA PVMVGCAVIC FAAPALAALH PSSRSFATGS AVRG
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