Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4765 |
Symbol | |
ID | 8328963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5675864 |
End bp | 5679514 |
Gene Length | 3651 bp |
Protein Length | 1216 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644945208 |
Product | hypothetical protein |
Protein accession | YP_003102440 |
Protein GI | 256378780 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCCG AAGAACGGGT CGCCGAGTCG CAGCCGGGGG CAGCGCACAA GCCTCAGGTC AAGCAGGCCA CGGCAGGCAG GGCAGCCGTG TCCGGCAAGG CGGGGCAGTC CGGTCAGCGG CACGGTGGGG TCGCTGCGGT GCAGCGGTTG CAGTTGGCCG CGGGGAACCG GGCCGTCGCT GGGGTCATGG GTGGCGGCGG TGGGGGTGGG CAGCGGGTCG AGGAGCGTGG GGCCGGCGGT GGGGCGGCGG AGGTCGAGGG GAACCTCGGG GTGTTCCAGG CCGAGGTCGC GGCGCGGCAG CACGTCGCCG CGCGGCACCC CTCGGCCGCC GCCGAGGCCG GCGAGGCGCA GCGGGCGGCC AAGGCGCCGG TCGACGACAA GGAGGCCCAG GGCAAGGTCG TCAACGCCGA GCGGATGGGC GCGGCGGAGC CTGGGGTGTT CGACCGGGCC GGGTTCGTGC GGGCGGTCGA GGAGGCGATC TCGGCGCAGG CTCCCCGGAA CCTGGACGAG GCGGACGAGC TGGCCGGGTC GGGCAAGGTC GACGCGGTGC GGGAGCGGGT GCGCGGGCCG GTCGGCGAGG GGCGGGCCGC CGTCGCGGGG CCGCTCGAAC GGGCCACCGC CGCCGCGCCC GACACGTCCG CCGCGCACGA GAAGCCGGTG ACACCACTGG GCGCCGAGCG GCAGGCTCCC GCGCTGACCG CGCCCGACCC TGCCGGCGCG GTTCCGGCTC CGACGCCCGC CGCCGCGCTC GACCTGTCCG CCGGGCCGCG CGAGGTGGAC GAGGAGCTGG CGCGCGCGGA CGTCACCGAC GAGCAGCTGG CGCGGGCGAA CGAGCCCGAG TTCACCGGCG CGCTCGCGGC CAAGCGGGAG AGCGCCGAGC ACGCGGAGGG CGCGCCGGGA CGGGTGCGGG GCGCGGAGGC GGTGGCGCAC GCGGACAGCA GGGCGTTCGC CGCGGGCCAG GGCTCGGCGG TGATGGCGGA GTTCTCGGCC GCCGGGAAGC GCGCGCACTC CGAGGTCGGC GCGGGCAAGC ACGGCGCGAA GGACGCGGAC GAGGCCGCTC GGGCGCGGGT GACCGCGACG TTGCAGAAGG TGTTCGACGG CACGCGCGCC GACGTGGAGA AGATCCTCGG CGACCTGGAC GGGAAGGTCG ACGCGCGGTT CACCGAGGGC GAGCGGGCGG CGCGGGCGGC GTTCAGCGCG GACCACGAGC GGCGCATGGA CGCCTACAAG GAGAAGCGCT ACTCCGGGAT CGCGGGCAAG GCGCGGTGGG TGAAGGACAA GTTCGCCGGG CTGCCCGAGG AGGCCGGGCA GATCTTCGCG CGGTCGCGGG AGCTGTACGT GGCGCGGATG CGGCAGGTCG TCGGCGGGGT CGCGGACCTG GTCGGGGGTG AGCTGAACCG GGCGAAGCAG CGGGTTGCGG CGGGCAGGGC GCAGCTGCGC TCGGCGGTGG ATTCGCTGGC GCCGGGCCTG CGCGTGATCG GCGGCCGGGC GGCGGCCGGG TTCGCGGAGC GGTTCGACGA GCTGGCCGGG ACCGTGGACG CCAAGGGCGA GGCGCTGGTC CAGGCGGTGA GCGAGAAGTA CCGGGGCGCG CTGGCGTCGG TCGACGAGGC GATCGAGGCA GAGCGGGCGG CGAACCAGGG GCTCGTGGCG AAGGCGAAGA ACGCGGTCGT GGGCGTGGTC GGCACCGTGC TGGAGCTGAA GGACCTGCTG CTGGGGGTGC TGGCGAGGGC GGCGTCGGCG GTGGCGGCGA TCCTGAAGGA CCCGATCGGC TTCCTGGCGA ACTTCGCGGC GGCGGTCGGC GCGGGCCTGC GCGGCTTCCT GGCGAACATC GCCGGCCACC TGCGCAAGGG CGTGCTGGAC TGGCTGCTGG GCGCGCTGTC CTCGGCGGGC CTGCGGCTGC CGGAGAAGTT CGACCTGCGC GGCGTGCTCG GCATGGTCGG CGACCTGCTC GGCCTGACCT GGTCGGCGAT CCGGGGCCGG GTCGTGGCGA AGGGCGTGCC GGAGCAGGCG GTGAGCGCGG CCGAGTCCTC GCTGCCGCTG GCGCGGAAGG TCCGGTCCGA GGGCATCGGC GGCGTGTGGG CCGAGGTGGA GGACCAGGTC GGCGACCTGA AGGGCGGACT GCTGGGCAAG ATCAGCGCGT TCCTGCTGCC GACCGTGCTG GTCGCGGGCG TCACCTGGAT CATCTCGCTG CTGAACCCGG CGTCGGCGTT CGCCAAGGCC GTGAAGGCGA TCGTGGACCT GGTGTCGTTC GTGGTGGAGC GGGCGGGCCA GATCGCGCGG TTCGTGAACG CCGTGCTGGA CGCGGTCGTC GCGGTGGCGG CGGGCGGCGG TGGCGGCGTC CCGGCGCTGA TCGAGAACGC GCTGGCGATG TCGGTCCCGG TGCTGATCGG CGCACTGGCG GCCGTCCTGG GCATCGGCGG CCTGGCGTCG AAGGTGCGCG GTTTCGTCCA GTCCCTGGCG AAGCCGGTGA ACAGGGCCGT GGACTGGGTG GTGGGGAAGG TCGTCACGGC GGCGAAGTCG TTGTGGGGGA AGGCGGAGGG CGCGTTCGGC CGGGGCGCGC CGGGCACCGC GAAGGGCAAG CCGGACCACG CGGCGGCGAT CCGGGACGCG GAGCGGATGC TGGCCTCGAA ACCGACGGCG GCTGCGGCGG TCGCGGCCAC CACTGCTATC GGACACCGGC ACGGGGTTCC AGCGAAACTG GTCACCGAGC GGGTGGACCA CGCGGGTGAG CACGTGCACG TGCAGACCGC GCGGACCGGC GGGCACCTGC TCGAAAGGCT GGTCAGCCCG GAGGAGCTGC GCGCCCTGGT GCGGAAGGCC GTGCGCAACG CCTTCAGCGG GTCCGGCATG AACCGGTTGC GGAACAAGAT GCGCAAAGCC CTCATCGAGA AGGGACACCT GATGGTCCCC AAGGGCCTGG CCTTCCCGGC TGGGGTCAGG GCGCTGTACC GCGCGGGCGT CCACATGGAG ACCGATAAGA GGGTGGACCA CACCGTCGGC TCGGGGAAGG GCGAGGTGCG GGTTTCCGAG CTGAAGACGA ATGGGCGGAC CAACGGCCTG GTCAACTACC TGGGCGCTTA CCCCGCGGTG CTCAAGAAGC TGGAACTCGT GAAGAAGAGG TGCCGCCTCG ACGACGCCGC GATCGCCGAC GAGATGCGCA TGTTCATCAA GACGGGGAAC ATGTCCCCCG CGGTCGACCC TAGGGCGCAG CGGATGCTCG GAAGGCTCGT CTACCTGGCG TTCCTGCGCG AGGGAACTCG CAACGACCGG GTCATAGCGC ACAGCATGAT GACGCTCGAC CTCATCTCCA AGGGGGACTG GGACTTCAAG CACGCGCTGA CGGGCTACAC GAGGGAGGAC GGCGGGCACC TAAGACCGGG CGGCGGGGGC GGACTCCCGA TGTCCATGGA AGGCGCCGTC GCCGCGTCGA ACGAGCTCGA CCGGAACGCG ATCGGCCTGC ACTCGGACCT GGCGGGTGCG GAGCAGGCCA AGCTCGTGGC GAACAAACGC GAACTGGAGG AGCGGGAGTT CGAACTGGCG ACCGACTGGT TGTCCGCCCA CGCGGAGCGC GACCGCGAGT TCGCCAGGCT GAGCAAGAAG CAGTTGCTGG AGAAGCTGAT GAGGGCGCTG CGTGACTTCT ACGGCGGGTG A
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Protein sequence | MKAEERVAES QPGAAHKPQV KQATAGRAAV SGKAGQSGQR HGGVAAVQRL QLAAGNRAVA GVMGGGGGGG QRVEERGAGG GAAEVEGNLG VFQAEVAARQ HVAARHPSAA AEAGEAQRAA KAPVDDKEAQ GKVVNAERMG AAEPGVFDRA GFVRAVEEAI SAQAPRNLDE ADELAGSGKV DAVRERVRGP VGEGRAAVAG PLERATAAAP DTSAAHEKPV TPLGAERQAP ALTAPDPAGA VPAPTPAAAL DLSAGPREVD EELARADVTD EQLARANEPE FTGALAAKRE SAEHAEGAPG RVRGAEAVAH ADSRAFAAGQ GSAVMAEFSA AGKRAHSEVG AGKHGAKDAD EAARARVTAT LQKVFDGTRA DVEKILGDLD GKVDARFTEG ERAARAAFSA DHERRMDAYK EKRYSGIAGK ARWVKDKFAG LPEEAGQIFA RSRELYVARM RQVVGGVADL VGGELNRAKQ RVAAGRAQLR SAVDSLAPGL RVIGGRAAAG FAERFDELAG TVDAKGEALV QAVSEKYRGA LASVDEAIEA ERAANQGLVA KAKNAVVGVV GTVLELKDLL LGVLARAASA VAAILKDPIG FLANFAAAVG AGLRGFLANI AGHLRKGVLD WLLGALSSAG LRLPEKFDLR GVLGMVGDLL GLTWSAIRGR VVAKGVPEQA VSAAESSLPL ARKVRSEGIG GVWAEVEDQV GDLKGGLLGK ISAFLLPTVL VAGVTWIISL LNPASAFAKA VKAIVDLVSF VVERAGQIAR FVNAVLDAVV AVAAGGGGGV PALIENALAM SVPVLIGALA AVLGIGGLAS KVRGFVQSLA KPVNRAVDWV VGKVVTAAKS LWGKAEGAFG RGAPGTAKGK PDHAAAIRDA ERMLASKPTA AAAVAATTAI GHRHGVPAKL VTERVDHAGE HVHVQTARTG GHLLERLVSP EELRALVRKA VRNAFSGSGM NRLRNKMRKA LIEKGHLMVP KGLAFPAGVR ALYRAGVHME TDKRVDHTVG SGKGEVRVSE LKTNGRTNGL VNYLGAYPAV LKKLELVKKR CRLDDAAIAD EMRMFIKTGN MSPAVDPRAQ RMLGRLVYLA FLREGTRNDR VIAHSMMTLD LISKGDWDFK HALTGYTRED GGHLRPGGGG GLPMSMEGAV AASNELDRNA IGLHSDLAGA EQAKLVANKR ELEEREFELA TDWLSAHAER DREFARLSKK QLLEKLMRAL RDFYGG
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