| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4745 |
|---|
| Symbol | |
|---|
| ID | 8328943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5656189 |
|---|
| End bp | 5656740 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644945188 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003102420 |
|---|
| Protein GI | 256378760 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.753558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGA AACGGCTGGA GAGCGCCGAC GAGGAGTTCC TCGTCCGGCG CACCGCCAGG
GGCGACCGCG CGGCGTTCGA GGAGCTCTAC CGCCGCACCT CGCCCTGGCT CGCGGTGCGG
CTGCGCCGCA GGTGCGCCGA CGAGCAGGTC GTGGCCGAGG TCATGCAGGA GACCTACCTG
GCGATCTGGC GCGCGGCGGG CTCGTTCGCC GGTTCGGCCG CGGACGGGAG CGCGGTCGGC
TGGATCTGGA CCATCGCGGC CCGCCGCCTG GTCGACGCCT TCCGGCGGCG CGGGCACCAC
GCCGAGCCGC CCGCCTCCGC CGTCGCGCCG CCGGTCCCGG CGGTCGAGGA GGAGGTGCTC
GCGGGCGTGC TCGGCGACGA GGTCGGGGAC GCGCTGCGGC GGCTCTCGCC CGAGCTGCGG
GACGTGCTGC GGGCCATGGT GCTCGACGGG CTCACGGTCA CCGAGACCGC CGTGGTCCTG
GGGGTGCCGG AGGGAACGGT GAAGACCCGC GCGCGCCGTG CGCGGATCGC GATGCGGGAG
GCGCTGTCGT GA
|
|---|
| Protein sequence | MKRKRLESAD EEFLVRRTAR GDRAAFEELY RRTSPWLAVR LRRRCADEQV VAEVMQETYL
AIWRAAGSFA GSAADGSAVG WIWTIAARRL VDAFRRRGHH AEPPASAVAP PVPAVEEEVL
AGVLGDEVGD ALRRLSPELR DVLRAMVLDG LTVTETAVVL GVPEGTVKTR ARRARIAMRE
ALS
|
|---|
| |