| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4732 |
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| Symbol | |
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| ID | 8328930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5644553 |
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| End bp | 5645908 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644945176 |
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| Product | Endo-1,4-beta-xylanase |
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| Protein accession | YP_003102408 |
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| Protein GI | 256378748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0396836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGA CAGCGAAGTC AGTCTCCCGA GCCGCACTCG CCTCCGCGCT CGCCGTGCTC
ACCGCCGCCG CGGTCGTGCT CGTGGCGACG CCCGCCAGTG GCGCCGCCTC GACGCTCGCC
GCCGCCGCGC AGCAGAAGGG GCGGTACTTC GGGACCGCCG TGGCCGCCAA CAAGCTCTCC
GACTCGACCT ACACCGGCAT CCTGAACCGC GAGTTCGACA TGGTGACGGC CGAGAACGAG
ATGAAGATGG ACGCCACCGA GCCCAACCAG GGCCAGTTCT CCTACGGCAA CGCCGACCGC
ATCGTCAACC AGGCCCGAGG GCAGGGCAAG CGAATCCGCG GGCACGCGCT CGCCTGGCAC
TCCCAGCAGC CCGGCTGGAT GCAGCGCATG GAGGGCTCCT CGCTGCGGCA GGCCATGCTC
AACCACGTCA CCCAGGTCGC CACCTACTAC CGGGGCAAGA TCTACGCCTG GGACGTCGTC
AACGAGGCCT TCGCCGACGG CAACTCCGGT GGCCGCCGCG ACTCCAACCT CCAGCGCACC
GGCAACGACT GGATCGAGGC CGCGTTCCGC GCCGCGCGCG CCGCCGACCC CGGCGCCAAG
CTCTGCTACA ACGACTACAA CACCGACAAC TGGTCGCACG CCAAGACCCA GGGCGTCTAC
CGGATGGTGC AGGACTTCAA GTCGCGCGGC GTCCCCATCG ACTGCGTCGG CTTCCAGGCG
CACTTCAACA GCGGCAACCC GGTGCCCTCC AACTACCACA CCACGTTGGG CAACTTCGCG
GCCCTGGGCG TGGACGTGCA GATCACCGAG CTGGACATCG AGGGCTCCGG CTCCGGCCAG
GCCCAGCAGT ACCAGGGCGT CACGCAGGCC TGCCTCTCCG TCGCCCGCTG CACCGGCATC
ACCGTCTGGG GCATCCGCGA CACCGACTCC TGGCGCGCCT CCGGCACCCC GCTGCTGTTC
GACGGCAGCG GCAACAAGAA GGCCGCCTAC AACTCCGTGC TGGCCGTGCT GAACGAGGGC
GGCGGGCAGC AGCCGACCAC CACCACCGGT CCGACCACGA CCACCACGAA CCCCGACCCC
GGCGGTGGCG GCTGCACCGC GACCTACTCG GAGGGGCAGA AGTGGAACGA CCGCTTCAAC
GGGCAGGTCG CGGTCTCGGG CGCCGACGAC TGGGTCGTCA CGGTCACCGT CAGCTCCCCG
CAGCGGATCA TCGCGACCTG GAACACCAGC GCCACCTGGG ACTCCAGCGG CAACGTGATG
ACCGCGCGGC CCAACGGCAG CGGGAACTCG TTCGGATTCA CCGTGCAGCA CAACGGGAAC
TGGAGCTGGC CCAGCCTCGC CTGCAGCAGG GGGTGA
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| Protein sequence | MTLTAKSVSR AALASALAVL TAAAVVLVAT PASGAASTLA AAAQQKGRYF GTAVAANKLS
DSTYTGILNR EFDMVTAENE MKMDATEPNQ GQFSYGNADR IVNQARGQGK RIRGHALAWH
SQQPGWMQRM EGSSLRQAML NHVTQVATYY RGKIYAWDVV NEAFADGNSG GRRDSNLQRT
GNDWIEAAFR AARAADPGAK LCYNDYNTDN WSHAKTQGVY RMVQDFKSRG VPIDCVGFQA
HFNSGNPVPS NYHTTLGNFA ALGVDVQITE LDIEGSGSGQ AQQYQGVTQA CLSVARCTGI
TVWGIRDTDS WRASGTPLLF DGSGNKKAAY NSVLAVLNEG GGQQPTTTTG PTTTTTNPDP
GGGGCTATYS EGQKWNDRFN GQVAVSGADD WVVTVTVSSP QRIIATWNTS ATWDSSGNVM
TARPNGSGNS FGFTVQHNGN WSWPSLACSR G
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