| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4730 |
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| Symbol | deoA |
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| ID | 8328928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5641562 |
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| End bp | 5642863 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945174 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_003102406 |
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| Protein GI | 256378746 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGAAGG TCGAACCCTT CGACGCCGTC GACGTGCTGC GCGCCAAGCG CAACGGGCAG
CGGCTGTCCA CCGAGCAGAT CGGCTGGATC GTCGACGCGT ACGCGCGCGG TCGGGTCGCG
GACGAGCAGA TGTCCGCGCT GCTGATGGCG ATCTGGCTCA ACGGCATGAG CCGCGAGGAG
ACCCGCGACC TGACGCTGGC CATCGTCGCC TCGGGCGAGC GGATGTCCTT CGCGGACCTG
GGGAAGCCCA CCACCGACAA GCACTCCACC GGCGGGGTCG GCGACAAGAT CACGCTGCCG
CTGACGCCGC TGGTCGCGTC GTTCGGCGTG GCGGTGCCGC AGCTGTCCGG GCGCGGGCTC
GGCCACACCG GCGGCACGCT GGACAAGCTG GAGTCGATCC CCGGTTGGCG CGCCGATCTG
TCCACAGAGG ACATCGTCGC GCAGCTGCGC GACGTCGGGG GCGTGGTGGC GGCGGCCGGG
TCCGGCCTGG CGCCCGCCGA CAAGAAGCTG TACGCGCTGC GGGACACCAC GGCGACCGTC
GACGCGATCC CGCTGATGGC GTCCTCGATC ATGTCGAAGA AGATCGCCGA GGGCACGGGC
GCGCTGGTGC TGGACGTGAA GTTCGGCTCG GGCGCGTTCC TGACCGACCT CGCGGACGCG
CGCGAGCTGG CCAGGACCAT GGTGGAGCTG GGCGAGGACG CGGGCGTGGC GACGAGCGCG
CTGCTGACCA ACATGAACGT GCCGCTGGGG CGGGCGATCG GCAACGCGAA CGAGGTCGCC
GAGTCGGTGG CGGTGCTGGA GGGCGGCGGC CCGGCGGACG TGCGGGAGCT GACCCTGGCG
CTGGCGCGGG AGATGCTGGC GCTGGCGGGC AGGCCGGACG AGGACGTGGC CGCCGCGCTG
GACGACGGCC GCGCGCTGGC GACGTGGCGG CGGATGGTGC GCGCGCAGGG CGGCGACCCG
GACGCGGCCC TGCCGACCGC GCGCGAGCAC GAGGTGGTGC GGGCCGACCG CGACGGCGTC
CTCGTTGAGC AGCGAGCACT CCCGTTCGGC ATCGCGGCCT GGCGGTTGGG CGCGGGCCGG
GCGCGCAAGG AGGACCCGGT GCAGCACGCG GCGGGCGTCG AGCTGCACGT GAAGCCGGGC
GAGGCGGTCA GGGCGGGGCA GCCGCTGTTC ACGCTGAGCG CGGACGAGGC GGCGCGCATC
CCGCGCGCGC TGGAGTCCCT GGCGGGCGCG TGGCGGATCG GCGACGCGGG CGACGAGGTG
CAGGGCGGCG GTCCGCTGAT CGCCGAGCGG GTCGGCCGCT GA
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| Protein sequence | MPKVEPFDAV DVLRAKRNGQ RLSTEQIGWI VDAYARGRVA DEQMSALLMA IWLNGMSREE
TRDLTLAIVA SGERMSFADL GKPTTDKHST GGVGDKITLP LTPLVASFGV AVPQLSGRGL
GHTGGTLDKL ESIPGWRADL STEDIVAQLR DVGGVVAAAG SGLAPADKKL YALRDTTATV
DAIPLMASSI MSKKIAEGTG ALVLDVKFGS GAFLTDLADA RELARTMVEL GEDAGVATSA
LLTNMNVPLG RAIGNANEVA ESVAVLEGGG PADVRELTLA LAREMLALAG RPDEDVAAAL
DDGRALATWR RMVRAQGGDP DAALPTAREH EVVRADRDGV LVEQRALPFG IAAWRLGAGR
ARKEDPVQHA AGVELHVKPG EAVRAGQPLF TLSADEAARI PRALESLAGA WRIGDAGDEV
QGGGPLIAER VGR
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