| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4719 |
|---|
| Symbol | |
|---|
| ID | 8328917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5628855 |
|---|
| End bp | 5630549 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644945163 |
|---|
| Product | 4-phytase |
|---|
| Protein accession | YP_003102395 |
|---|
| Protein GI | 256378735 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0883166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGAGAA CCACCAGCAC CCTGGCGATC GCCGGGTTCA CGGCAGGAGC CATCGTCCTG
TCCGCGTGCT CCGGGACGTC TGGCCAGTCC ACCGGTTCCG GTGGCACGGA CGGCGCCCCC
GTCAAGGGCG GCACCGTCCA GGTCCTCCAG GCCACCGACT TCTCCTACCT GGACCCGTCG
CGGGGCTGGG ACGGCGGCGT CAACTCGTTC TACCGGCTGA TCTACCGCCA GCTCATCACC
AAGGCGCCCG CCGACGCCGC GAACCCGAAC GAGATGGTCC CGGACCTCGC CGAGTCGCTG
GGCACGCCGT CCGCCGACGG CCTGACCTGG ACGTACAAGC TCAAGGACGG GATCAAGTTC
GACACCGGCG CGCCGATCAC CGCGCAGGAC GTCAAGTTCG GCATCACCCG CAGCTGGGAC
CCGGAGATCG GCATCGGCGC CCCCTACCTC AAGCAGCTGG TGGACGCGCC CGCCGACTAC
CAGGGCCCCT ACCGCTCCGG CGACCTGCCC ACGATCGAGA CGCCCGACGA GCGGACCATC
GTGTTCCGCC TGAAGGCGCC GTTCCCCGAG TTCGACGCGG TCCTGTCGAT GCCGACCGGC
ACCCCGTTCC CGGTCGGCAC CGGCGGCGGC GACTCGTTCA TCAAGGACGT CATCGCCTCC
GGCCCGTACG ACGTCAAGTC GTTCACCCCC GGCAGCAAGA TCGAGCTGGT GCGCAACCCC
AACTGGGACG CCGCCACCGA CACCGCCCGC AAGGCCTACC CGGACGCCTG GAACTTCGTC
ATCGGCGTCG ACCGCGCCAC CATCGACGAG CGGCTCATCG CGGGTCAGGG CAGCGACGTG
AACGCGGTCG CCGCGACCGT GCAGACCGCC ACGATCGCCC GCATCCAGAC CCCGCAGCTC
AAGGAGCGCA CCGTCAAGGA GCCCTCCACC TGCACCACCT ACATGGGGCT GAACACCACC
AAGGGCCCGC TGGCCGACGT CAAGGTGCGC CAGGCGATCA ACTACGCGGT GGACAAGAGC
GCGGTGCTCA ACGCCACCGG CGGCAACCAG TTCGCCACCG TCTCCACCAC GATCCTGCCG
TCCTCGGTCA CCGGCTACAG CCAGTACGAC CTGTACCCGA GCAAGGACAA CGCGGGCGAC
GTCGAGAAGG CCAAGCAGCT GCTCGCCGAG GCGGGCCACG CGAACGGCTT CCCGCTGGTC
CTGGACGTGC GCTCCAACCC GGTCGCCCAG CGCCAGGCCG AGTCGATCCA GCAGTCCCTG
CAGAAGATCG GCATCGAGGT CAAGCTCAAC GTCATCGACG TGGCGACCTA CTACGAGACC
ATCGCGACCC CGTCCGTCCA GAACGACGCG GCCATCACCG GCTGGTGCCC GGACTGGGCG
TCCAGCGCCT CCACGTTCCT GCCGCCGCTG TTCGACGGCC GCAAGATCAC CGACAAGGGC
AACCAGAACC TCTCGCAGAT CAACGACCCG GCGATCAACG CCGCGATCGA CGCGAACATC
GCCGAGACCG ACCTGGACAA GGCCACCAAG GCGTGGGGCG AGCTGGACAA GCAGGTCATG
GAGCTGGCCC CGATCGTCCC GCTGAACGTG GAGAACCGGA TCTACCTGCC GGGCTCCAAC
GTCACCGGCT TCCACGCCCC CGGCGGCGAC GTCGACTACG CCATCCTCGG CCTGAAGGAC
GCGGGGAAGG CCTGA
|
|---|
| Protein sequence | MRRTTSTLAI AGFTAGAIVL SACSGTSGQS TGSGGTDGAP VKGGTVQVLQ ATDFSYLDPS
RGWDGGVNSF YRLIYRQLIT KAPADAANPN EMVPDLAESL GTPSADGLTW TYKLKDGIKF
DTGAPITAQD VKFGITRSWD PEIGIGAPYL KQLVDAPADY QGPYRSGDLP TIETPDERTI
VFRLKAPFPE FDAVLSMPTG TPFPVGTGGG DSFIKDVIAS GPYDVKSFTP GSKIELVRNP
NWDAATDTAR KAYPDAWNFV IGVDRATIDE RLIAGQGSDV NAVAATVQTA TIARIQTPQL
KERTVKEPST CTTYMGLNTT KGPLADVKVR QAINYAVDKS AVLNATGGNQ FATVSTTILP
SSVTGYSQYD LYPSKDNAGD VEKAKQLLAE AGHANGFPLV LDVRSNPVAQ RQAESIQQSL
QKIGIEVKLN VIDVATYYET IATPSVQNDA AITGWCPDWA SSASTFLPPL FDGRKITDKG
NQNLSQINDP AINAAIDANI AETDLDKATK AWGELDKQVM ELAPIVPLNV ENRIYLPGSN
VTGFHAPGGD VDYAILGLKD AGKA
|
|---|
| |