Gene Amir_4717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4717 
Symbol 
ID8328915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5626899 
End bp5627897 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID644945161 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003102393 
Protein GI256378733 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.764925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCGCT ACGTCGTGAA CCGCGTCCTG GGCATGGTCG TGGTGCTGTT CCTGGTCTGC 
CTGTTCACCT ACCTGGTGTT CTTCGCGCTC TCGCCGGACC CGGCCGTGCA GATCTGCGGC 
AAGAACTGCA CGCCCGAGCG CATCGACCAG ATCCGCGCCA ACCTCGGCCT GGACGCGCCG 
TTCCTCACCC AGTTCGGGCT GTTCCTCGCG GGCCTGTTCG TCGGCCGCGA CTACGGCAGC 
GGGCCGTCGC TGATCGAGTG CCACGCCCCG TGCCTGGGCT ACTCGTTCCA GACCTCGCAG 
CTGGTCACCG ACATGATCGT GCAGCGCCTG CCGGTCACCG CGGTGGTCGC GATCGGCGCC 
GCCGTGCTGT GGCTGTCCAT GGGCGTGATC GGCGGTCTGG TCAGCGCGGT GCGCGAGGGG 
AGGTTCGCGG ACAAGTTCAT CACCGGCCTC ACCCTCGGCG GCATGTCGAT CCCGAACTAC 
GTGCTCGCGC TCGCGCTCCA GTACGTGTTC GTGATCTGGT TGCAGTGGCT GCCGTTCCCG 
CAGGCCGTGC CGTTCCTGGA CGACCCCGTC CAGTGGTTCC TGAACTTCGT CCTGCCGTGG 
ACGGTCCTCG CGATCGGCTA CGCGTCCTCG TACACCCGGC TCACCCGCGC GAACGTGCTC 
GACACGCTCG GCGAGAACTA CGTGCGCACG GCCCGCGCCA AGGGCCTGCA ACCGTCGCTG 
GTGTGGCGGC GGCACGCGCT GCGCCCGGCG CTCACGCCCA TCGTGACCAT CGCGGGCATG 
GACTTCGCAG GCCTGCTCGG CGGCGCCCTG ATCACCGAGA CCGTGTTCGG GATCAACGGC 
GTCGGCAAGC TCGCCGCCGA CTCCATCACC AAGAACGACC AGCCGGTGAT CATGGCCGTC 
ACGCTGCTCG CCGCGTTCTT CGTGGTCGTC GGCAACATGG TGGTCGACCT GCTGTACTCG 
GTGATCGACC CTCGGGTCAG GGCGGGGGCG ACCGCGTGA
 
Protein sequence
MTRYVVNRVL GMVVVLFLVC LFTYLVFFAL SPDPAVQICG KNCTPERIDQ IRANLGLDAP 
FLTQFGLFLA GLFVGRDYGS GPSLIECHAP CLGYSFQTSQ LVTDMIVQRL PVTAVVAIGA 
AVLWLSMGVI GGLVSAVREG RFADKFITGL TLGGMSIPNY VLALALQYVF VIWLQWLPFP 
QAVPFLDDPV QWFLNFVLPW TVLAIGYASS YTRLTRANVL DTLGENYVRT ARAKGLQPSL 
VWRRHALRPA LTPIVTIAGM DFAGLLGGAL ITETVFGING VGKLAADSIT KNDQPVIMAV 
TLLAAFFVVV GNMVVDLLYS VIDPRVRAGA TA