| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4711 |
|---|
| Symbol | |
|---|
| ID | 8328909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5617627 |
|---|
| End bp | 5619573 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644945155 |
|---|
| Product | ATP-dependent endonuclease of the OLD family- like protein |
|---|
| Protein accession | YP_003102387 |
|---|
| Protein GI | 256378727 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCT CGAAGGTTCG GATCAAGAAC TTTCGCTGCC TGGCGGACGT CGAAGTGCGC
TTCGACCAGG TCACGACGTT GATCGGGCCG AACGGCGTCG GCAAGTCGAC CGTGCTGCGA
GCGCTGGACT GGTTCTTCAA CGGGACCAAG CCCGGTGCGC TCCTGGACGA GGACCGCACC
GGCGGTGCTG AGGGCGACGT GGTCGTTGAG GTCGAGTTCG ACCAGTTGAC CGACGCCGAC
CGCGAGGAAC TGGGCAAGCA CGTCCCCGCC CAGTCCGAGC GGTGCGTCAT CTGGAAGATC
CGTCGCGCCG ACGGCACTGA GTTGATGAGC GCCAACGCCC GAGCCTTCCA GGGGTTCGCC
TGGATCAGGG AGGTGGCCGG TGCTGCCGAG ATGCGCGTCC GGTACCAGCA GGTGCGCACT
GATCTCCCCG ACCTCGGTCT CCCCGCGGTG AGGTCCAAGC CGGAGGTCGA GGCCGCGCTC
AAGGCGTGGG AGCTGGCCAA CCCGGACCGG TTGGACGACG CCGAGGTCGC GGTCACCAAC
CTGTTCGGCT TCAACGGGCA GGCGAAGATG TCCGGGCTGT TCGACTACGT GTTCGTCAGC
GCGGACATGC GCGTGGAGGA GGAAGCGAAG GACGGTCGCA GCGCCCTGGT CGGCCGCATC
CTGGAGCGCA CGGTCGACCG CACCGCCGCA GACGCAGACA TCAAGGCGCT CGCGGCGGAT
GTCGAGAGCA GGCAGGACGG GATCTTCGCG AAGAACTTCG CGAAGCAGTT GAGCACCCTG
TCCGCGTCGT TGTCCGAGGC GGTCGGCCAG TACACCGTGG GGCGCGCGGT CAAGGTCCAG
GCGACCAAGC AGAAGATCGA GCCGCCGCGC ACCCAGTTCT CCCTGTCCGT CACGGACTCG
TCGGTCGACA CCCCGGTGGA GAAGCAGGGC CACGGGTTCC AGCGCACCCT CCTCATCGCC
GCCCTGCAGC TGCTGGCCAA GCACGGCAAC GCCGAGCGCG GCAGCGGTGC GATCTGCCTG
GCCATCGAGG AGCCTGAGCT CTTCCAGCAC CCGGTCCAGG CGCGCACCTT CGCGTCCGTG
CTGCGCACCC TGGCCGAGGA CGACGCGCAG AACATCCAGG TCGCATACGC CACCCACAGC
CCGCACTTCA TCGACCCCAG CCGGTTCGAG CAGGTCCGGC GGGTCACAAG GGACCCCAAG
CCGGAGAAGG GGTGCGCGCC AACCGTGACG GTGCGGTCCG CTTCCGTGGA GTCGGTGGAG
AAGCGCCTCG TCGGCTACTT CGACAACGTC AGGAACCGAT TGCCCGCAAT CGCCGAGACC
GCCTTGGCCG AGGCGCTGTT CTCCAGCGGA GCCATTCTCG CCGAGGGCAG CAGCGACAAG
GCGGTGATCA CCGGTCTGGC TGAGAAGTCC TCGAAGACCT CCCTGCTCAA CTGCGGGGTG
ACCGTCGTGG ACATGAACGG CAAGTCCAAC CTCTTCATCG GGCACGCGGT CCTCGCCGAG
TTGGGCGTCC CCTGCTACGT CGTGTTCGAC GGCGACCTCG GACTTGAAGG CCGCAAGCGG
CTCAACGCCC AGCCGGACAA GGAGGACCCC GAGACGTGGG CCAAGAAGTT CGAGGCTGAC
CTCGCTGCCG CGCTGGCGAA GAACACCAAG GACAACCGCA ACCTCCTCCA GTACCTGGGA
ACCACGCCCA GCGACTACCC GGAGACTTGC GCCCACGCGA GCTACGCGGC CTTCGTCGAC
ACCATCGAAC CGCTGCTCGC GGCGGAGTGG CCGGGGTGGC AGGAGAAGCT GTCGGAGGTC
ATGAAGGACA ACCTGATCGC TGGCAGGAAG AACGCCCTCG CCTACCTGCT CACCGCCCGC
CAGATCACCT CCGAACCCCC GGAGTTCTTC ACCGCGCTGC TGCGCCACGC GCGCAACATG
GTGTCGGCCG ACCCCGCAGG CGGCTGA
|
|---|
| Protein sequence | MRISKVRIKN FRCLADVEVR FDQVTTLIGP NGVGKSTVLR ALDWFFNGTK PGALLDEDRT
GGAEGDVVVE VEFDQLTDAD REELGKHVPA QSERCVIWKI RRADGTELMS ANARAFQGFA
WIREVAGAAE MRVRYQQVRT DLPDLGLPAV RSKPEVEAAL KAWELANPDR LDDAEVAVTN
LFGFNGQAKM SGLFDYVFVS ADMRVEEEAK DGRSALVGRI LERTVDRTAA DADIKALAAD
VESRQDGIFA KNFAKQLSTL SASLSEAVGQ YTVGRAVKVQ ATKQKIEPPR TQFSLSVTDS
SVDTPVEKQG HGFQRTLLIA ALQLLAKHGN AERGSGAICL AIEEPELFQH PVQARTFASV
LRTLAEDDAQ NIQVAYATHS PHFIDPSRFE QVRRVTRDPK PEKGCAPTVT VRSASVESVE
KRLVGYFDNV RNRLPAIAET ALAEALFSSG AILAEGSSDK AVITGLAEKS SKTSLLNCGV
TVVDMNGKSN LFIGHAVLAE LGVPCYVVFD GDLGLEGRKR LNAQPDKEDP ETWAKKFEAD
LAAALAKNTK DNRNLLQYLG TTPSDYPETC AHASYAAFVD TIEPLLAAEW PGWQEKLSEV
MKDNLIAGRK NALAYLLTAR QITSEPPEFF TALLRHARNM VSADPAGG
|
|---|
| |