| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4698 |
|---|
| Symbol | |
|---|
| ID | 8328896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5587851 |
|---|
| End bp | 5594192 |
|---|
| Gene Length | 6342 bp |
|---|
| Protein Length | 2113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644945142 |
|---|
| Product | thioester reductase domain protein |
|---|
| Protein accession | YP_003102374 |
|---|
| Protein GI | 256378714 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3321] Polyketide synthase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01746] thioester reductase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGG ACAAGGAAGA CAAGCTCGTC GAGTACCTGA AGTGGGTCAG CGCCGACCTG
AAGAAGACCA AGCAGCGCCT CGCCGAGCTG GAGTCGGGCA AGCGCGAGCC GGTCGCCATC
GTCGGCATGG CCTGCCGCTT CCCCGGCGGC GTGTCCTCAC CCGAGGACCT GTGGCGGCTG
GTCGCCGACG GCCGGGACGC CATCGCGCCC TTCCCCGACG ACCGGGGCTG GGACACCGAC
GGCATCTACG ACCCCGAACC GGGCCTGCCC GGCAAGTCCT ACTCGAGGCA CAGCGGGTTC
ATCGCGGACG CCACCACGTT CGACGCCGAG TTCTTCGGCA TCAGCCCCCG CGAGGCCACC
GCCATGGACC CCCAGCAGCG GGTCCTGCTG GAGGTCGCCT GGGAGGCGCT CGAACGCGCC
CACCTGGACC CGGCCGCGCT CAGGGGCAGC CGCACCGGCG TGTTCGCGGG CATCGTCGCC
CAGAGCTACC TGGGGCTCAG CGGCCCCACC GACCTGGAGG GCTACCTCAC CACCGGCGGG
CTCGGCAGCG TCGCCTCCGG CCGGGTGTCC TACTCGCTCG GGCTGGAGGG ACCGGCGGTG
TCGGTCGACA CCGCGTGCTC GTCGTCGCTG GTCGCGCTGC ACCTGGCCGC CCAGTCGCTG
CGCCAGGGCG AGTCCACCCT CGCGCTGGCG GGCGGCACCA CCGTCTACGG CACGCCGTCG
GCGTTCGTGG ACTTCTCCCG CCAGCGCGGC CTCGCCCCCG ACGGGCGCTG CAAGTCGTTC
GCCGAGGCCG CCGACGGCAC CACCTGGTCC GAGGGCGTCG GCGTGGTCGT GCTGGAACTG
CTGTCCGAGG CCCGCCGCAA CGGCCACGAG GTCCTCGCGG TGCTGCGCGG CTCCGCCGTC
AACCAGGACG GGGCCTCCAA CGGCCTCACC GCCCCCAACG GGCCCTCGCA GCAGCGCGTC
ATCCGCGCCG CCCTGGCCGA CGCCCGGCTC ACCGCCGCCG ACGTCGACCT GATCGAGGCC
CACGGCACCG GAACCCGCCT CGGCGACCCG ATCGAGGCCC AAGCGCTGCT CGCCACCTAC
GGCCAGAACC GCGCCCGACC CGCGTGGCTG GGCTCGCTCA AGTCCAACAT CGGCCACACC
GTCGCCGCGG CGGGCGTGGC GGGCGTCATC AAGTCCGTGC TGGCCATCCG GCACGGCGTG
CTGCCCGCGA CCCTGCACGT CGACCGGCCC ACCCCGGTGG TGGACTGGTC GGCGGGGCAG
GTCAGGCTGC TCACCGAGCA GCGCGACTGG CCGGAGACCG ACGGCCCCCG CCGCGCCGCG
GTCTCCGCGT TCGGCGTGAG CGGCACCAAC GCGCACGTGA TCGTGGAGCA GGCCCCGCCG
CCCGCCGAGA CCGCCCCGAC CGACCCGCGG CCACCGCTGC CCGCGCACGC CCTGCCGCTG
TCGGCCCGCT CCGAGCGGGC CCTGTCCGCG CAGGCCGACC GGCTGCTGCG CTGGTGGGCC
GACCACCCCG ACGCCGACCC GGCCGCCGTG GCCGTGGCCG CCGCCACCAC CCGCTCCGCC
CTGTCCCACC GGGCCGTCGT CCTCGGCGGG AACCGCGCCG ACCTGGAGCA GGGCCTGACC
GCGCTCGCCG AACGGGCCAC CGCGGCGGCG GGCCCGCCGT CCGCCGTCGG GACGGCGGGC
ACGTCCGCCT CCGTCGTCAC CGGTTCACCG GTCGCGGGCA AGACCGCGTT CCTGTTCACC
GGCCAGGGCG CCCAGCGCCC CGGCATGGGC CTGCGCGCCG CCGCCGCGTT CCCGGCGTTC
GCCGAGGCGC TCGCCGACGT CGAGCGGGCA CTGGCCCCGC ACGGCGGGAC GCCGCTGCGG
GAGCTGCTGG CCGACTCCGA CGCCGGGGCG CTGCGCGACA CCGGGAACGC CCAGCCCGCC
CTGTTCGCGA TCGAGGTCGC CCTGTTCCGG CTGCTGGAGT CCTGGGGCGT GCGCCCCGAC
CTGCTCGCCG GGCACTCCAT CGGCGAGATC GCCGCCGCCC ACGTCTCCGG CGTGCTCTCG
CTCGACGACG CGGCGACCCT GGTCAGCGCC CGTGCCCGGC TCATGTCCGC GCTGCCCGTG
GGCGGCGGGA TGCTCGCGGT GCGCGCCTCC GAGGAGGAGG TGCTGCCGCT GCTGGCCGGT
CGCGAGGACG TGCTCGGGAT CGCCGCCGTC AACGGCCCCG CCTCCGTCGT GCTCTCCGGT
TCGGCCGACG CGCTCGACGA GGCCGCCGCC CGGCTGACCG CCGCCGGGCG CTCGGTCAGG
GCGCTGTCGG TCAGCCACGC CTTCCACTCG CCGCTGATGA GGCCGATGCT CGACGAGTTC
GCCGAGGTCG CCGCCACCCT GAAGTACCGC GAGCCCACCA TCCCGGTGGT CTCCACCGCC
ACCGGCGACC TCGTCACCGC CGAGCTGACC GACCCCGGCC ACTGGGTGCG GCACGTCACC
GGCGCGGTGC GGTTCGCCGA CGCCGCGCGC GCACTGCGCG AGCTGGGCGC CACCACCTTC
GCCGAGCTGG GCCCCGGCGA GGTGCTCAGC GCCCTCGTGC AGGAGGCGCT GGACGCGAAC
GCCGCGGTGC TGGCCGTGCC GCTGCTGCGC CAGGCCGACA CCGAGGCCGA CGGCGTCGTC
CGCGCCGTCG CCCGCCTGCA CACCAGGGGG ACGGCGGTCG ACTGGGCCGC CTTCCTCGGC
GGCGCGCACC CCGCGCTCGA CCTGCCCACC TACGCCTTCC AGCGCACCCG GTTCTGGCTG
GAGCACGACG GGTCCCGCGC CGACCTGTCC TCGGTCGGCC TCACCCCGGT CGACCACCCG
CTGCTCGGCG CGGCCGTCCC GGTCGCGGGC TCCGACGCGC TCGTGGTCAC CAGCCACGTC
TCGGTGCGCA GCCACCCGTG GCTGGCCGGG ACCGCCGTCG ACGGCGTCCT GGCCCTGCCC
GGCGCGGTGC TCGTCGAGCT GGCCGGGCGC GCGGGCGACG AGCTGGGCTG CACGCTGCTG
CGGGAGCTGG TGGTGCCGCG CCCGCCCGCG CTGCCCGTCG ACGGTGGCCT GGCCATCCAG
CTCGTCCTCG GCGCGGCCGA CCCCGACGGC GTCCGCTCCC TGCTCGTGCA CACCCGCCCC
GACGACGACC CCGAGGCGGA GTGGGAGTTC GCCGCAGGCG GCTCGCTGTC CGCCGACCAC
TCCGCCCCGA CCCACTCCGC CCCGAACCAC GCCGCCCCGC TGGAGCTCCC CGACGGCGAC
GCCTTCCCGG TGGCGCTGCC CGAGGGCTCG GCCGCCGACG CCGCCGCCTA CAACCTGCAC
CCGGCCCTGC TCGCCGAGGC CGTGCGCGCC GCCACCGGCG GCCGGGTCCC CACCCGCTGG
AGCGGGGTGC GCCTGCACGC GGTCGGCGCT ACCTCGGTCG TCGTCCGCGC GAGCCTCGAC
GGCGACCGGC TCGCGCTGCG GCTCTCCGAC CTGGCGGGCG GCCCCGTCGC CACCGTCGAC
GAGATCACCC TCCACGCGGG CGACCCCCTC ACCCCCGACC GCACCGCCGC CGCCCGCAGG
GCGCTGTTCG ACGTGGTCTG GAAGCCACTG CCCGTCCCGT TACCGCCCGT CCCGTCACCG
ACTACCCGCA CCACGGCCGT GCTCGACACC GGACGAGGTC TGCCCGACCT GCCCGGCGCG
ACCGTCGTCC GCACCCCGGC CGACGCCCCG GACGCCGACC TGCTCGTCGC CCCGTTCCTG
ACCGGGGCCG CCGACACCGA CGTCCCCGAC CGGGTGCTCG CCGACGCCAC CGCCGCCCTG
GACCTGGTCC GCGACTGGCT CGCCCAGCCC CGACCCGCAG GCTCCCGGCT CGTCGTGCTC
ACCTCCGGCG CCACCGACGC GCACGCCCTC ACCAGCCCGC ACACCGCCCC CCTGTGGGGC
CTGCTCAAGT CCGCCCAGGC CGAGAACCCC GACCGCCTCA CCCTCGTCGA CGTCGCCGAC
GACTGGGACC CCGCCCTGCT GCCCGCCGCC GTCGCCACCG GCGAACCGCT GCTCGCGCTC
GGCGCGGACG TCCGAGCGCC CCGCCTGCGC CGCGCCCCCA CCGCGATCGC CGACCACTCC
TGGCGGCGCC GGGCGCGCGG CGGCTCCGTC CTCGTCACCG GCGGCACCGG CGCGCTCGGC
GCCCTGTTCG CCCGCCACCT CGTCACCGCC CACGGCGCGG CCCGCGTCGT CCTGGTCAGC
CGCAGCGGCC CCGCCGCCCC CGGCGCGGGC GAGCTGTGCG CGGACCTGCG CCGCGCGGGC
GCCGGGGTGG AGGTGCTCGC CGCCGACACC ACCGACCCGG CCGCGCTGGC CGAGGTGCTG
CGCGACCGGC GGATCGACCT CGTCCTGCAC ACCGCGGGCG TCCTGGACGA CACCGCGCTG
CAAACCCTCA CCCCCGAGCG CCTGGCGGCC GTGCTGCGCC CCAAGGTCCA CACCGCCTGG
CACCTGCACC GGCTGCTCCC CGAGGCCCAC CACGTCCACT TCTCCTCCAT CGCCGCCACC
ATCGGCGGCC CCGGCCAGGC CAACTACGCC GCCGCCAACA CGTTCCTGGA CGCGCTCGCC
CACCTGCGCG CCGACCGGGG CGCGCCCACC ACCTCGATCG CCTGGGGCCT GTGGGCCATG
CCCACCGGCA TGGGCGGCGC GCTCTCCGAG GTCGACCTGG CCCGCATCGC CCGCGCGGGC
TTCCGCCCCG TCACCCCCGA CCGGGGCCCG GCGCTGCTCG ACGCGGCCCT CGACAGCGGC
CTGCCCGCCG TCGTCGCCAC CCCGCTCGAC ATCACCGCCA TCCGCGCCTC CGGCACGCCC
CAACCCCTGT TCGCGGACCT GGTGCGCACC CCGCTGCGCC GCAGGGCCGT CAACACCGAC
ACCTCCGCCG CCCCCGACCC GCTCGCCGAA CCCGACCCCG CCCGCAGGCG CGCCCTGCTG
CTCGACCTGG TCGGCGCCGA GGTCGCGGCC GTCCTCGGCC TGCCCGCCCC GCCCGAGCCG
CACCGCCCGT TCCCCGAGCT GGGCTTCGAC TCGCTCACCT CGGTCGAGCT GCGCAACCGG
CTCGCCGCGA CCCTCGGCTC ACCCCTGCCC GCCTCGCTCG TGTTCGACCA CCCCACCCCC
GACGCGGTCG CCGACTTCCT GCGCGACCTC GGCGCCCCGC AGGCGCCCGC CCGCGCCGAG
GTCGACTTCG CGCGGGAGGC GCTGCTGGCC GACGACGTCG TCCCCGCCGC CACCACCGCC
ACCCACGCCG CCGACCCCGA CGAGGTGCTG CTCACCGGGG CCACCGGGTT CCTGGGCGCG
TTCCTGCTCA GGGACGTGCT GCGCACCACG CGGGCCCGCG TGCACGCCGT CGTGCGCGCC
CCCGACGCGG CCACCGGGCT CGCCAGGATC GCCGAGAACC TGCGCTGGTA CCGGCTCGAC
GACGAGGTCG ACCTGTCCAG GGTCGTCGTG CACCCCGGCG ACCTCGGCCT GCCCGGCCTC
GGCCTGCCCG AGGACGTGCG CGACCTGCTG GCCCGCACCG CCGACGTCGT GTTCCACGCG
GGCGCCGAGG TCAACTGGCT CCAGCCCTAC CAGGCGCTGC GCCCGGTGAA CGTCGCGGGC
ACCGAGGAGG TGCTGCGCCT GGCCGCCGCC CACCGCACCG TGCCCGTGCA CTTCGTGTCC
TCCACGGGCG TGTTCGACCA GCCCGTCACC CCCGGCGTGC CGCTGACCAC CGACGACATC
CCCGGACCGC CCGAGGTGCT CTCCAACGGC TACCGCCAGT CCAAGTGGGT GGCCGAGCGC
ATGATCGACC AGGCCCGCGA GCGCGGCCTG CCCGTCTCGG TGTACCGGGT CGACGTGGTC
TCCGGCGACC AGGTCAACGG CGCCTGCCAG ACCAGGGACT TCGTGTGGCT GGGCCTGAAG
GGCATCCTGC GCAGCGGCGC CGTCCCCGAG GGCCTGGAGG GCCGGTTCCA CCTGGTGCCG
GTCGACTACG CCAGCGCCGC CATCACCCAC CTGTCCACCA GGCCGGAGGC GGCGGGCCGC
ACCTTCCACG TCTCCAACCC CGCCCCGATC ACCTACCGGG ACATGATCGG CCACCTCAGG
TCGCTCGGCC ACGAGCTGGC GGAGCTGCCC CCGGCCGAGT GGAGCGCGCG GGTGCGCGCC
GACCGGGACA ACGCCCTGCA ACCGCTGCTC GACTCGTTCG AGGCCATCGC CGCCGCGGGC
GAGGGCGCCT ACCCGGACTT CGACGTCACC GGGACCGACG AGGCGCTGCG CGACGCGGGC
CTGACCTGCC CGCCGATGAC CGGCGAGCTG TTCACCAGAT ACGTGCGCTT CTTCACCGAC
GCGGGCTACT TCCCCCGCGC GGGCGCGGAC AGCCTGAACT AG
|
|---|
| Protein sequence | MSQDKEDKLV EYLKWVSADL KKTKQRLAEL ESGKREPVAI VGMACRFPGG VSSPEDLWRL
VADGRDAIAP FPDDRGWDTD GIYDPEPGLP GKSYSRHSGF IADATTFDAE FFGISPREAT
AMDPQQRVLL EVAWEALERA HLDPAALRGS RTGVFAGIVA QSYLGLSGPT DLEGYLTTGG
LGSVASGRVS YSLGLEGPAV SVDTACSSSL VALHLAAQSL RQGESTLALA GGTTVYGTPS
AFVDFSRQRG LAPDGRCKSF AEAADGTTWS EGVGVVVLEL LSEARRNGHE VLAVLRGSAV
NQDGASNGLT APNGPSQQRV IRAALADARL TAADVDLIEA HGTGTRLGDP IEAQALLATY
GQNRARPAWL GSLKSNIGHT VAAAGVAGVI KSVLAIRHGV LPATLHVDRP TPVVDWSAGQ
VRLLTEQRDW PETDGPRRAA VSAFGVSGTN AHVIVEQAPP PAETAPTDPR PPLPAHALPL
SARSERALSA QADRLLRWWA DHPDADPAAV AVAAATTRSA LSHRAVVLGG NRADLEQGLT
ALAERATAAA GPPSAVGTAG TSASVVTGSP VAGKTAFLFT GQGAQRPGMG LRAAAAFPAF
AEALADVERA LAPHGGTPLR ELLADSDAGA LRDTGNAQPA LFAIEVALFR LLESWGVRPD
LLAGHSIGEI AAAHVSGVLS LDDAATLVSA RARLMSALPV GGGMLAVRAS EEEVLPLLAG
REDVLGIAAV NGPASVVLSG SADALDEAAA RLTAAGRSVR ALSVSHAFHS PLMRPMLDEF
AEVAATLKYR EPTIPVVSTA TGDLVTAELT DPGHWVRHVT GAVRFADAAR ALRELGATTF
AELGPGEVLS ALVQEALDAN AAVLAVPLLR QADTEADGVV RAVARLHTRG TAVDWAAFLG
GAHPALDLPT YAFQRTRFWL EHDGSRADLS SVGLTPVDHP LLGAAVPVAG SDALVVTSHV
SVRSHPWLAG TAVDGVLALP GAVLVELAGR AGDELGCTLL RELVVPRPPA LPVDGGLAIQ
LVLGAADPDG VRSLLVHTRP DDDPEAEWEF AAGGSLSADH SAPTHSAPNH AAPLELPDGD
AFPVALPEGS AADAAAYNLH PALLAEAVRA ATGGRVPTRW SGVRLHAVGA TSVVVRASLD
GDRLALRLSD LAGGPVATVD EITLHAGDPL TPDRTAAARR ALFDVVWKPL PVPLPPVPSP
TTRTTAVLDT GRGLPDLPGA TVVRTPADAP DADLLVAPFL TGAADTDVPD RVLADATAAL
DLVRDWLAQP RPAGSRLVVL TSGATDAHAL TSPHTAPLWG LLKSAQAENP DRLTLVDVAD
DWDPALLPAA VATGEPLLAL GADVRAPRLR RAPTAIADHS WRRRARGGSV LVTGGTGALG
ALFARHLVTA HGAARVVLVS RSGPAAPGAG ELCADLRRAG AGVEVLAADT TDPAALAEVL
RDRRIDLVLH TAGVLDDTAL QTLTPERLAA VLRPKVHTAW HLHRLLPEAH HVHFSSIAAT
IGGPGQANYA AANTFLDALA HLRADRGAPT TSIAWGLWAM PTGMGGALSE VDLARIARAG
FRPVTPDRGP ALLDAALDSG LPAVVATPLD ITAIRASGTP QPLFADLVRT PLRRRAVNTD
TSAAPDPLAE PDPARRRALL LDLVGAEVAA VLGLPAPPEP HRPFPELGFD SLTSVELRNR
LAATLGSPLP ASLVFDHPTP DAVADFLRDL GAPQAPARAE VDFAREALLA DDVVPAATTA
THAADPDEVL LTGATGFLGA FLLRDVLRTT RARVHAVVRA PDAATGLARI AENLRWYRLD
DEVDLSRVVV HPGDLGLPGL GLPEDVRDLL ARTADVVFHA GAEVNWLQPY QALRPVNVAG
TEEVLRLAAA HRTVPVHFVS STGVFDQPVT PGVPLTTDDI PGPPEVLSNG YRQSKWVAER
MIDQARERGL PVSVYRVDVV SGDQVNGACQ TRDFVWLGLK GILRSGAVPE GLEGRFHLVP
VDYASAAITH LSTRPEAAGR TFHVSNPAPI TYRDMIGHLR SLGHELAELP PAEWSARVRA
DRDNALQPLL DSFEAIAAAG EGAYPDFDVT GTDEALRDAG LTCPPMTGEL FTRYVRFFTD
AGYFPRAGAD SLN
|
|---|
| |