| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4694 |
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| Symbol | |
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| ID | 8328892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5581888 |
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| End bp | 5584389 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945138 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003102370 |
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| Protein GI | 256378710 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTTA GGATGTTAGG GCCGCTGGAG GTCCTCGACG GCGACCGCGC GGTGGGCCTC
GGGGGCACCC GGCAGCGGGC GACGCTGGGC TTCCTGCTGC TGCACCTGAA CCGGGTGGTG
GCCACCAGCC AGCTGCTCGG GGCCCTGTGG ACCACCGAGG CCCCCGCGTC CTCGCGGAAG
ATACTGCAGA ACGCGGTGTG GGGGCTGCGC GGCGCGCTGT CGTCGTCGGG GCGCTCGCCG
GAGTCGGCGA CCCTGGTCAC CCAGACCCCC GGCTACATGC TCAGCGTCGA CCCGTCCAGG
GTCGACCTGC ACAGCTTCCA CCAGCTGGCC GAGGAGGGGC AGACCAAGCT CGCCGCGCGC
GAGTTCGAGG ACGCCAGCCG GGTGCTGAAC CGGGCGCTGG GCCTGTGGCG CGGGCCCGCG
CTGGCCGACC TGGTGGAGAC CGGGCTGGCC TGGTCGGAGC TGAGCGTGCT GCAGAACCTG
CGGCTGGACG TGCTGGAGGA CTACTTCGAG GCCGAGCTGT CCTGCGGGCG GCACCACGCG
GTGCTGGGCG AGCTGGAGCG CACGGTGGAG GCCAACCCGG TGCGCGAGCG GGCCTGCGGG
CAGCTGATGC TGGCCCTGTA CCGGTGCGGG CGCCAGGCCG ACGCCCTGAC CGTGTTCAGC
CGGGTCAGGG GCGCGCTGGT GGAGGAGCTG GGGCTGGAGC CGTGCCGCGA GCTGAAGTCG
CTCCAGCACG CGATCCTCAC CCACGACCAG ACCCTCACCT ACCCCCCGGC GGGGGCGCTC
ACCACGATCC CGGCGCAGGT GGGGCGGTCG GCGGAGGCCG AGTCGGGCGC GCGGGCGGTG
GTGCTGCCCG GCTCGGGCCG CCCGGTGGCC CACTTGGCGG GGCCGCACCT GGCGGGGCCG
CACCTGGTCG TGCCGGGCGC GGTCGCGCTC TCCGGGGCGG TGACCGCGCT GGCCACGCCG
GAGGGGCCCG CGCGACTGGC GCCGGACGGC GGCCAGGACG GGGACGAGCG CGGGGACGAG
CGCGCGAGGG CGGGCGAGGC CGGCCCCGTC GAGGTGGACG GGATCGAGGT GGACGGGATC
GAGGTGGACG GGGTCGACGG GCCGCCGCCG GACGACGAGC GGTTCCGGCC GTCGGTGGTG
CCCGCGCAGC ACCGGCACGT CAGCGTGCTC ATGGTGCACA GCACGATCGA GCTCGACGAC
GACGCCAACC GGTTCGACGT GCTCGACGGC ATCGCCGCCA CCATCCGGGA GGGCGTCGAG
TACTTCGGCG GCGTGGTGGC CGCCTGCATC GGGTCGGTGA CGATGGCGCT GTTCGACGTG
CCGCGCCGGA TGGACAACAA CGCCGAGCGG GCCGTGCGGG CGGCGCTGGC GATCCGGGAC
TGCCTGGCCC CCGAGCTCCA GTCGGTGGCG GGCGCGCGGG TGGTGGTGCG CTCGGCGGTG
ACCACCGGGG AGGCGCTGGT GCGCTACCAG AGCACCGAGC AGGGCGCGCA GCTGAGCGTG
AACGGGCCGC CGGTGGAGGA GTGCCAGTCG GTGCTGCTGG GCGTGCCGGT CGGCGAGACC
TGGGTGTCGG AGACCACCCG CCGGGAGACC GAGTTCACCG TGCTGTGCCA CCAGGTGGTG
ACGCCGGTGC GGTTGTGGCA GGTCGAGGGG GTGCGGCCGG AGGCGTTCCC GCACCAGAGC
GTGCCGGTGG TGGACCGGGA GCCGGAGCTG GAGCTGCTGC GCGGGCTGAT GACCCGCACC
CGGCACCGGA CCTCCCCGTA CCTGGTCACG GTGCTCGGTG AGGCCGGGGT GGGCAAGACG
CGGTTCCTGG TGGAGTTCCA GCGGCGGGTG GTCGGGCACC CGTCGACGGG GCAGTTCGTG
CTCGCCCACG CCTGCTGGTC CGACCAGGAG GCGGTGCGGG CGGTGCGGGC GGAGATCCTG
GCCTCGTGCT GCGGGATCCA GCACCGCGAC GACGTGGCGT CGGTGCGGGA GAAGCTGGGC
GCGGCGGTGC GGCGGCACCT GCCGCCGGGG CGGGCGCACG AGGTGTTCGA CGCGCTGCTG
CCGCTGGTGG CGCGGGGGGT GGGGCCCTGC GGGGAGCTGG ACGGGCCGTG GCGGGAGCTG
ATCGGGGCGG TGGCGCGCGA CCGGGGCATG GTCATGGTGG TGGACGACCT GCACTGCGCG
GGCGAGGAGC TGCTGTCGTT CGTGGAGGGC CTGGTCGACT CGTTCGGGCA GGTGCCGCTG
CTGGTGATCA CCGCGGCGCG ACCGGACCTG GTGGAGCGGC GGCCGGACTG GGGTGGCGGG
CTGCGGCACG CCACCACGTT CACCCTGGAC CCGCTGTCGG ACGAGGCCAT AGACCGACTG
CTGGAGCTGC TGCTGACCAG CTCCGACACC GAGGGGGAGC AGGGGGCGGC GACCCCGCGC
AACGGCAACG AGCTGGACGC CCGCCGGGAG CACATCCGGA TGCTGCTGTG CCTGGACCGC
CGGATGCTCA CCGACACCTC GGCCCAGCTG CGCACGAGTT GA
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| Protein sequence | MFFRMLGPLE VLDGDRAVGL GGTRQRATLG FLLLHLNRVV ATSQLLGALW TTEAPASSRK
ILQNAVWGLR GALSSSGRSP ESATLVTQTP GYMLSVDPSR VDLHSFHQLA EEGQTKLAAR
EFEDASRVLN RALGLWRGPA LADLVETGLA WSELSVLQNL RLDVLEDYFE AELSCGRHHA
VLGELERTVE ANPVRERACG QLMLALYRCG RQADALTVFS RVRGALVEEL GLEPCRELKS
LQHAILTHDQ TLTYPPAGAL TTIPAQVGRS AEAESGARAV VLPGSGRPVA HLAGPHLAGP
HLVVPGAVAL SGAVTALATP EGPARLAPDG GQDGDERGDE RARAGEAGPV EVDGIEVDGI
EVDGVDGPPP DDERFRPSVV PAQHRHVSVL MVHSTIELDD DANRFDVLDG IAATIREGVE
YFGGVVAACI GSVTMALFDV PRRMDNNAER AVRAALAIRD CLAPELQSVA GARVVVRSAV
TTGEALVRYQ STEQGAQLSV NGPPVEECQS VLLGVPVGET WVSETTRRET EFTVLCHQVV
TPVRLWQVEG VRPEAFPHQS VPVVDREPEL ELLRGLMTRT RHRTSPYLVT VLGEAGVGKT
RFLVEFQRRV VGHPSTGQFV LAHACWSDQE AVRAVRAEIL ASCCGIQHRD DVASVREKLG
AAVRRHLPPG RAHEVFDALL PLVARGVGPC GELDGPWREL IGAVARDRGM VMVVDDLHCA
GEELLSFVEG LVDSFGQVPL LVITAARPDL VERRPDWGGG LRHATTFTLD PLSDEAIDRL
LELLLTSSDT EGEQGAATPR NGNELDARRE HIRMLLCLDR RMLTDTSAQL RTS
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