Gene Amir_4691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4691 
Symbol 
ID8328889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5577939 
End bp5579090 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID644945135 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003102367 
Protein GI256378707 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAACA AGCCGATCGA GAGGGGAAAT CCCTTGTCCC GCAACCGACT CCTGCTCGGC 
GCGCTGGTCG CGACGACCGC GCTCGCCGCC GGCGCCGCCC CCGTCGCGCT CGCCGACCAG
GAGGCGCGCG AGAGCGACCG CGCCGTCCGC CAGGGCCTGG AGCGGCTGGT CACCGCGCAC
GGCTTCCCGT CCGCGATGGC CTCGGTCCGC GAGCGCGACG GCCGCACCCG CTTCCTCGCC
CCCCGTGCCG GGGAGCGCGT CCCGGTCGAC GGCCAGGTGC GGATCGGCAG CGCCGGCAAG
ATGTTCGTCA GCGCCGTCGT CATGCAGCTG GTCGCCGAGG GGAAGGTGGA CCTGGACGCC
CCGGTGGAGA CCTACCTGCC CGGACTGGTC AGGGGCGAGG GCTTCGACGG CCGCGAGATC
GCCGTCCACC AGCTCCTCCA GCACACCAGC GGCATCCCGG AGTACACCGA CGTCGTCGCG
GACGACGTCC TGGCGATCCG GCACACCCAC TACGAGCCGC ACGAGCTGCT CGACGTCGCG
CTCGCGCGTC CGCGAACCGT GCCGCAGAAC GAGAAGACCT ACTACAGCAA CACGAACTAC
GTCCTCGCCG GCCTGCTCGT GCAGCGGGTG ACCGGGCGCC CGCTGGGGGA GGAGATCACC
CGCCGCGTCA TCGAACCGCT GGGCCTGCGC GAGACCTACT GGCCGGGCGT GGGCGAGGAG
CGCATCCGCG AGGCGCACCC GCGCGGGTAC GTGGTGAAGG ACGGCACGCG CACCGACATC
AGCGACCTCG ACCCGTCGTG GGCCTGGTCG GCGGGCAACC TCGTGGCGTC CCCCAGCGAC
CTCAACAAGT TCCTGGCCGC GCTCGTCGGC GGACGGCTGG TCGCACCGGA GCAGCTGGCG
AGGATGCAGC GCACCGTCGA GGCCGACAGG TTCCCGTCGA CCTGGCACTA CGGGCTGGGC
CTGATGAAGA TCGATTTGAG CTGCGGCGGC CACGCCTGGG GCCACGGCGG CGACATCGAC
GGCTACGAGA CCCGTGACGC GGTCACCGAT GACGGGCGCG CGGCGACCGT GGTGGTGACC
GCGCTGCCCG ACAGCAACGA GCAGGTCGAG GCGGTCAACG AGGTGCTGGA CACCGCGCTC
TGCGCGAGGT GA
 
Protein sequence
MSNKPIERGN PLSRNRLLLG ALVATTALAA GAAPVALADQ EARESDRAVR QGLERLVTAH 
GFPSAMASVR ERDGRTRFLA PRAGERVPVD GQVRIGSAGK MFVSAVVMQL VAEGKVDLDA
PVETYLPGLV RGEGFDGREI AVHQLLQHTS GIPEYTDVVA DDVLAIRHTH YEPHELLDVA
LARPRTVPQN EKTYYSNTNY VLAGLLVQRV TGRPLGEEIT RRVIEPLGLR ETYWPGVGEE
RIREAHPRGY VVKDGTRTDI SDLDPSWAWS AGNLVASPSD LNKFLAALVG GRLVAPEQLA
RMQRTVEADR FPSTWHYGLG LMKIDLSCGG HAWGHGGDID GYETRDAVTD DGRAATVVVT
ALPDSNEQVE AVNEVLDTAL CAR