Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4691 |
Symbol | |
ID | 8328889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5577939 |
End bp | 5579090 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644945135 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_003102367 |
Protein GI | 256378707 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGAACA AGCCGATCGA GAGGGGAAAT CCCTTGTCCC GCAACCGACT CCTGCTCGGC GCGCTGGTCG CGACGACCGC GCTCGCCGCC GGCGCCGCCC CCGTCGCGCT CGCCGACCAG GAGGCGCGCG AGAGCGACCG CGCCGTCCGC CAGGGCCTGG AGCGGCTGGT CACCGCGCAC GGCTTCCCGT CCGCGATGGC CTCGGTCCGC GAGCGCGACG GCCGCACCCG CTTCCTCGCC CCCCGTGCCG GGGAGCGCGT CCCGGTCGAC GGCCAGGTGC GGATCGGCAG CGCCGGCAAG ATGTTCGTCA GCGCCGTCGT CATGCAGCTG GTCGCCGAGG GGAAGGTGGA CCTGGACGCC CCGGTGGAGA CCTACCTGCC CGGACTGGTC AGGGGCGAGG GCTTCGACGG CCGCGAGATC GCCGTCCACC AGCTCCTCCA GCACACCAGC GGCATCCCGG AGTACACCGA CGTCGTCGCG GACGACGTCC TGGCGATCCG GCACACCCAC TACGAGCCGC ACGAGCTGCT CGACGTCGCG CTCGCGCGTC CGCGAACCGT GCCGCAGAAC GAGAAGACCT ACTACAGCAA CACGAACTAC GTCCTCGCCG GCCTGCTCGT GCAGCGGGTG ACCGGGCGCC CGCTGGGGGA GGAGATCACC CGCCGCGTCA TCGAACCGCT GGGCCTGCGC GAGACCTACT GGCCGGGCGT GGGCGAGGAG CGCATCCGCG AGGCGCACCC GCGCGGGTAC GTGGTGAAGG ACGGCACGCG CACCGACATC AGCGACCTCG ACCCGTCGTG GGCCTGGTCG GCGGGCAACC TCGTGGCGTC CCCCAGCGAC CTCAACAAGT TCCTGGCCGC GCTCGTCGGC GGACGGCTGG TCGCACCGGA GCAGCTGGCG AGGATGCAGC GCACCGTCGA GGCCGACAGG TTCCCGTCGA CCTGGCACTA CGGGCTGGGC CTGATGAAGA TCGATTTGAG CTGCGGCGGC CACGCCTGGG GCCACGGCGG CGACATCGAC GGCTACGAGA CCCGTGACGC GGTCACCGAT GACGGGCGCG CGGCGACCGT GGTGGTGACC GCGCTGCCCG ACAGCAACGA GCAGGTCGAG GCGGTCAACG AGGTGCTGGA CACCGCGCTC TGCGCGAGGT GA
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Protein sequence | MSNKPIERGN PLSRNRLLLG ALVATTALAA GAAPVALADQ EARESDRAVR QGLERLVTAH GFPSAMASVR ERDGRTRFLA PRAGERVPVD GQVRIGSAGK MFVSAVVMQL VAEGKVDLDA PVETYLPGLV RGEGFDGREI AVHQLLQHTS GIPEYTDVVA DDVLAIRHTH YEPHELLDVA LARPRTVPQN EKTYYSNTNY VLAGLLVQRV TGRPLGEEIT RRVIEPLGLR ETYWPGVGEE RIREAHPRGY VVKDGTRTDI SDLDPSWAWS AGNLVASPSD LNKFLAALVG GRLVAPEQLA RMQRTVEADR FPSTWHYGLG LMKIDLSCGG HAWGHGGDID GYETRDAVTD DGRAATVVVT ALPDSNEQVE AVNEVLDTAL CAR
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