| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4685 |
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| Symbol | gabD2 |
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| ID | 8328883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5571598 |
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| End bp | 5573214 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945129 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003102361 |
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| Protein GI | 256378701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGG AGCAGAGCCG GGTCTCGGAG CACGCGGCGA CGGGCGAGCG CCCCGCCTGG
GTCACCGACG AGGTGGTCGC CCGGTGGTGC GAGCGGGTGC GCAGGGACGT GACCCGGCGG
GGCGGCGGCG CGCCCGACCC GGTCGTCGCC ACCGCGCCCT ACGACCTGGC GCCGGTGGCC
ACCGTCCCGG CCTGCGCGCC CGAGGACGTC GCGTCCGCCG TCGTCACCGC CCGCGACGCC
CAGCGCGCGT GGGGCAAGTC CTCGTTCGCG CTGCGCGCCG AGGTCGTCCT GGCCTTCCAC
GACCTGCTGC TGGCGCGCCA GGACCAGGTG CTCGACCTGA TCCAGTGGGA GACCGGCAAG
GCCCGCTACC ACGCCTGGCA GGAGGTCGCC CAGGTCGCCA CGATCGCCCG CCACTACGCG
CGCCGCGCCA GGCACTACCT CGCGCCCAAG CGGGTGCGCG GCATGGTGCC CGTGCTGACC
AAGGTCAGGG AGGTGCGCGT GCCCAAGGGC GTCGTCGGGG TCATCTCGCC GTGGAACTAC
CCGCTGTACC TGGGCGTCGG CGACGTGCTC CCGGCGCTGA TGGCGGGCAA CGCGGTGGTC
TCCAAGGCCG ACTCGCAGAC CGCGCTCACC CTGCTGTGGA CGCGCCTGCT GATGGCCGAG
GCGGGCCTTC CCGAGGACCT GTGGCAGATC GTCACCGGCT CCGGCTCGGT GGTGGGGTCC
GCGCTGGTCG ACAACGTCGA CTTCATCTGC TTCACCGGCT CCACCGCGAC CGGCCGCGCG
GTCGCCGAGC GGGCCGCGCG CAGGCTCATC GGCGCGTCGC TGGAGCTGGG CGGCAAGAAC
CCGCTCGTGG TGCGCGAGGA CGCCGACGTG GAGGCCGCCG TGGCGGGCAC CATTCCGGCC
GCCTTCGCCA ACAGCGGGCA GATGTGCATC CACGTCGAGC GCGTCTACGT GCACGAGAAG
GTCTACGGCG CCTACCGCGA CGCCCTCGTG CGCGCGACGA GCGCGCTCCG CCTCGGCCAG
GGCTACGACT ACGCCTCGGA CCTCGGCTCG CTCGTCTCAC CCGCCCAGCT CGCGTCCGTC
GAGGCGCACG TGGGCGACGC GGTGGCCAAG GGCGCGACCG TGCTGGCGGG CGGGAAGGCG
CGGCCGGACG TCGGGCCGCT GTGCTACGAG CCGACCGTGC TGGAGGGCGT CACCCGCGAC
ATGGCCGTGC ACGGCGAGGA GACGTTCGGG CCGGTGCTCT CGCTCTACCC GTTCCGCACC
GACGACGAGG CCGTCGCGCT CGCCAACCAG GGGACCTACG GGCTGTCCGC GTCGATCTGG
TCGCGCGACA GCCGCACGGC CGAGCGGATG GCGCTGCGCA TCCGGTCCGG GTCGGTGAAC
GTCAACGACG GCGCGATGGC GGCGGCGGGC AGCATCGAGG CGGGCATGGG CGGCATGGGG
GAGAGCGGAC TCGGCAGGCG GCACGGCGCC GAGGGCATCC GCAAGTACAC CGAGAGCCAG
ACCATCGCCG AGCAGCGGCT CATGCCGCTC GGGCCGTCGC CGAAGGCGCC CGTGGCCGAC
TTCATCCGCA GCACCAACCG GCAGCTGGCG CTGCTGAAGC GGTTCCGGGT GCGCTGA
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| Protein sequence | MSTEQSRVSE HAATGERPAW VTDEVVARWC ERVRRDVTRR GGGAPDPVVA TAPYDLAPVA
TVPACAPEDV ASAVVTARDA QRAWGKSSFA LRAEVVLAFH DLLLARQDQV LDLIQWETGK
ARYHAWQEVA QVATIARHYA RRARHYLAPK RVRGMVPVLT KVREVRVPKG VVGVISPWNY
PLYLGVGDVL PALMAGNAVV SKADSQTALT LLWTRLLMAE AGLPEDLWQI VTGSGSVVGS
ALVDNVDFIC FTGSTATGRA VAERAARRLI GASLELGGKN PLVVREDADV EAAVAGTIPA
AFANSGQMCI HVERVYVHEK VYGAYRDALV RATSALRLGQ GYDYASDLGS LVSPAQLASV
EAHVGDAVAK GATVLAGGKA RPDVGPLCYE PTVLEGVTRD MAVHGEETFG PVLSLYPFRT
DDEAVALANQ GTYGLSASIW SRDSRTAERM ALRIRSGSVN VNDGAMAAAG SIEAGMGGMG
ESGLGRRHGA EGIRKYTESQ TIAEQRLMPL GPSPKAPVAD FIRSTNRQLA LLKRFRVR
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