| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4682 |
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| Symbol | |
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| ID | 8328880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5566698 |
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| End bp | 5568479 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945126 |
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| Product | cellulose-binding family II |
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| Protein accession | YP_003102358 |
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| Protein GI | 256378698 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACCAA CAAGGTCGAC CTCGGCGTGG GCGCCCGCCC GCGCGGCACT GGCGTTCGGG
CTCGCCGGGG TGCTCGCCCT CGCCGGGCTG GTCGCCACCA GCCCGCCCGC GGGCGCCGCC
GCGGTGCCCG CGTTCCCCGG CGCGTCCGGG CCCGCGATGT ACGCGAGCGG CGGGCGGGGC
GGGGACGTCT ACCACGTCAC CAACCTCACC GACAACGCCG CAGGCCCGCA GCCCGGTTCG
CTGCGGCACG GCATCAGCAC CGCGCCCAGC GCGGGCCGCA CCATCGTGTT CGACGTCGCG
GGCACCATCA AGCTCTCCCC CGCCGGACGC CAGGGCTGGC TCGGGATCGG CGCGAGCAAC
CTGACCATCG CGGGGCAGAC CGCGCCCAAG CCCGGTGTCA CGATCATGGG CCAGGCCACC
AAGGTCACCG GGAAGAACGT CGTCCTGCGG CACCTGAAGT TCCGCCCCGG CAAGGACCAG
GCCAACCCCG GCAGCGCCAC CAACGACGGC CTGTGGATCA CCGGGGACAA CGTGGTCGTC
GACCACGTCT CGGTCAGCTG GGCCGACGAC GAGGGCATCA GCGCCAGCGA CGGCGCGGGC
CAGGTGACCG TGCAGCACTC GATCGTCGCG GAGGGCCTGA ACTACGCGGG CCACTCGTAC
GGCTCGCTGA TCGGCAGCGA CGTGGCGGGC TCGGCGATCG GCTACCACCA CAACCTCTAC
GCCCACAACA CCAGCCGCCT CCCCAGGCTG GGCAACGAGA CGAACGCGAC GAACCACGTC
GAGTGGAGCA ACAACGTCAT CTTCGAGGGC AAGGGCTACA GCGGCGCGAA CCAGCCGGTG
AACGCCAACT TCGTCGGCAA CACCTACCTG CGGCACAACT CCGGCGATCC CGAGGTCTAC
ACGGGCGCGG CGGGCACCAC GATCCACCAG TCCGGCAACA AGGTCGACTA CGACGGCGAC
TCGAACACCA CCAACGGCAA GGACGCCCCC ACGAGCGCGT TCTCCGCGTC CACGCTGCGC
TCCAGCCGCT TCCCCGTCCC GAACATGACC ACCGAGCCCG CGTACACCGC GCTGCCGAAG
GTGCTCTCGA ACTCGGGCGC GTTCTGGTGG GCGCGCGACG CCGTCGACAC CCGGATCGTC
GCCGAGACCC GCACGACCAG CGGCGGGATC GTCAACGAGT ACGACCAGTC CGAGTGGAAC
GCCCTGTGGA ACGCCGCGCA GGTGGGCACC CCGAGCGGCT GGGACACCGA CCGCGACGGG
ATGCCGAACG CCTGGGAGAG CGCGAACGGC CTGAACCCGA ACGCCGCGGA CCACAACGGC
GACGCGGACG GCGACGGCTA CCGCAACATC GAGGAGTACC TGGACCACGC GGCGAACGGC
GGGGCGGGCA CCCCGCCGAC CACCACGACG ACCAGCCGCA CCACCACGAC CACCCCGCCG
ACCACGACCA CCCCGCCCAC GACGACCACC ACCCCGCCGC CGGGTGGAAG CGGTTGCACG
GCGGCCTACC GCACCACGAA CTCCTGGTCG GGCGGCTTCC AGGGCGAGGT GACCGTGACG
GCGGGCGGCG CGGGCACCGC GGGGTGGTCG GTGGCCTGGG CGCTGGGCTC GGGCCAGGCG
ATCACCCAGG TGTGGAACGG GGTGCTGACC ACCAGCGGGT CGAGCGCGAG CGTGGCGAAC
GAGTCGTACA ACGGAGCGCT GGCGGCGGGC GCGTCCACCG CGTTCGGCTT CACCGCCACC
GGGTCGGCGA CGTCGCCGAT CCCGAGCTGC GCGCGCGGGT AG
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| Protein sequence | MAPTRSTSAW APARAALAFG LAGVLALAGL VATSPPAGAA AVPAFPGASG PAMYASGGRG
GDVYHVTNLT DNAAGPQPGS LRHGISTAPS AGRTIVFDVA GTIKLSPAGR QGWLGIGASN
LTIAGQTAPK PGVTIMGQAT KVTGKNVVLR HLKFRPGKDQ ANPGSATNDG LWITGDNVVV
DHVSVSWADD EGISASDGAG QVTVQHSIVA EGLNYAGHSY GSLIGSDVAG SAIGYHHNLY
AHNTSRLPRL GNETNATNHV EWSNNVIFEG KGYSGANQPV NANFVGNTYL RHNSGDPEVY
TGAAGTTIHQ SGNKVDYDGD SNTTNGKDAP TSAFSASTLR SSRFPVPNMT TEPAYTALPK
VLSNSGAFWW ARDAVDTRIV AETRTTSGGI VNEYDQSEWN ALWNAAQVGT PSGWDTDRDG
MPNAWESANG LNPNAADHNG DADGDGYRNI EEYLDHAANG GAGTPPTTTT TSRTTTTTPP
TTTTPPTTTT TPPPGGSGCT AAYRTTNSWS GGFQGEVTVT AGGAGTAGWS VAWALGSGQA
ITQVWNGVLT TSGSSASVAN ESYNGALAAG ASTAFGFTAT GSATSPIPSC ARG
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