| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4663 |
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| Symbol | |
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| ID | 8328861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5552303 |
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| End bp | 5553307 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945109 |
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| Product | Pectinesterase |
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| Protein accession | YP_003102341 |
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| Protein GI | 256378681 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4677] Pectin methylesterase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0682309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCGC ACGGCACCCG CACGACCCGA GGCGCGGCGG CGCTCTCGGC CCCGCTGCTG
GCGCTCGCGC TGGCCACCCC GGCGCAGGCC GCCACCACGG TCACCGTCGC CGCCGACGGT
TCCGGCGACT ACACCACCGT CCAGGCCGCC ATCGCCGCGG TCTCCTCCGG CTCCACCATC
AAGATCAAGC CCGGCACCTA CAGGGGCCAG GTCTCCATCC CCGCAGGCAA GCCGGGGCTG
GTCCTGCAGG GCACGTCCGG CAACTCGGCC GACGTCGTGA TCACCGGGAG CACCCCGGCG
TCCACGGCGG GCACCGAGGG CAGCGCCACC GTCCTCAACA AGGCCAAGGA CACCTCGGTC
ACCGGCCTGA CCATGGCCAA CACCTACGCC GCGCACGACA GCCAGGCGCT GGCCCTGTAC
GCGGGCGGCG ACCGGCAAGT GTACCGCAAC GTGCGGATGC TCGGCTACCA GGACACGTTC
CTGTCCTGGG GCGGCACGGG CGGCTCCCAG GTGCGCCAGT ACGTCTACAA GAGCTACATC
GAGGGCGCCG TCGACTTCAT CTACGGCAAC GGCGCGCTGG TCGTCGACTC GACCACCATC
CAGTCCCTGG ACCGGGGCAG CAGCAACAAC GGCTACATCA CCGCCGCCGC CACCCACTCG
TCCAACCCGT ACGGCATCCT GATCACCAGG TCCACGTTGA AGGGGCCGTC GGCGGCCAAG
ACCGTGGCGC TGGGCCGCTG CTGGCACGCG GGTGGCGCGG CCGACGCGAT CGGCCAGGTG
CTGGTGCGCG ACTCCACGCT CGGCGGTCAC GTCCGGCAGG CGGGCGCGTG GCAGGACATG
GGCGGTTTCT CGTGGAAGAC CTGCCGCTTC ACCGAGCACA ACAACTCCGG TTCCGGCGTC
ACGACCGGGA CGAGCGACCG GCCGCAGATG AGCGCGTCCA CCGCCGCGAA CCACACCGCG
CAGAAGTACC TCGCGGGCAG CGACGGCTGG AACCCCGTGC AGTGA
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| Protein sequence | MSPHGTRTTR GAAALSAPLL ALALATPAQA ATTVTVAADG SGDYTTVQAA IAAVSSGSTI
KIKPGTYRGQ VSIPAGKPGL VLQGTSGNSA DVVITGSTPA STAGTEGSAT VLNKAKDTSV
TGLTMANTYA AHDSQALALY AGGDRQVYRN VRMLGYQDTF LSWGGTGGSQ VRQYVYKSYI
EGAVDFIYGN GALVVDSTTI QSLDRGSSNN GYITAAATHS SNPYGILITR STLKGPSAAK
TVALGRCWHA GGAADAIGQV LVRDSTLGGH VRQAGAWQDM GGFSWKTCRF TEHNNSGSGV
TTGTSDRPQM SASTAANHTA QKYLAGSDGW NPVQ
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