| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4658 |
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| Symbol | |
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| ID | 8328856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5547438 |
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| End bp | 5548211 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945104 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102336 |
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| Protein GI | 256378676 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.863601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTG TCGTCATCTC CGGGGCGTCG TCCGGCATCG GGCTCGCCAC CGCCCGGCGC
TTCGCCGAGG CCGGGGACCG GGTGGTCAAC CTGGACCTGA AGCCGCCCGC ACCCGCCGAC
GAGGTGGGGC GCACGGCGCT GGTGGACGTC TCGGACTGGT CCGCGGTGCG GGCGGCGGTC
GACGCGGTCG CGGCCGAGCA CGGCGGGGTC GACGTGGTGG TCGCCAACGC GGGCATCAGC
CTGCGCAGGC TGTTCCTGGA CATGACCGAG GAGGACGTCA CCGGGCTGCT CAAGGTGAAC
GTGCTCGGCG TGATGGGCCT GTGGCAGGCG GCGGCCAGGC ACATGGTCGC GGCGGGCGGC
GGGGTGCTGC TGGCCACCGC GTCCACGAAC GCCTCCGTCG GCTACCCGTA CTACGCCGAC
TACAACGCCT CGAAGGCCGC GGTGCTGGCG CTGACCAGGA CGTTGGCGCT GGAGTACGCG
CCGCTGATCC GCACCGGCTG CGTCAGCCCC GGTTACGTGA TGACGCCGAT GCAGCGGGCC
GAGTACACCG ACGAGATGCT CGCCGAGGTC AACGCGCGCA TCCCGGCCGG GCGGCACGCC
GACCCGTCGG AGATCGCCGA CGCGTTCTTC TTCCTGGCCT CGCCGCAGGC GAAGTACCTG
ACCGGGCAGC AGCTCGTGGT CGACGGCGGC GAGCTGGCGG GCGGCACGGC CTCCGGCTAC
CGCACGGTGT TCGGCGACGG CGTCCTCGGC GCGGGCGGCA GCGGGGCCGA GTAA
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| Protein sequence | MRTVVISGAS SGIGLATARR FAEAGDRVVN LDLKPPAPAD EVGRTALVDV SDWSAVRAAV
DAVAAEHGGV DVVVANAGIS LRRLFLDMTE EDVTGLLKVN VLGVMGLWQA AARHMVAAGG
GVLLATASTN ASVGYPYYAD YNASKAAVLA LTRTLALEYA PLIRTGCVSP GYVMTPMQRA
EYTDEMLAEV NARIPAGRHA DPSEIADAFF FLASPQAKYL TGQQLVVDGG ELAGGTASGY
RTVFGDGVLG AGGSGAE
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