Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4655 |
Symbol | |
ID | 8328853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5542504 |
End bp | 5544816 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945101 |
Product | hypothetical protein |
Protein accession | YP_003102333 |
Protein GI | 256378673 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.134449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTTG GGTTCGCCGG GCACGCCGCC GCCCGCGTGG GCGCCCCCGC GGCCGGACCG GCTCGGGGCG CGGACGCGGC CGTTCGGGTG TGGTCCGCCG AGAGCCGCGA CACGGAGGCC AACCACATGA CCGGGACCGA GTCCGCGCCG CCCAGCACCA CCGCCCCACC CCGCGCGAGC AGCGCGAACG CCCTGGAGAT CGCCGTCGTC GGCGTCGGCC CGCGCGGCCT GTCCGTGCTG GAGCGCCTGT GCGCCAACGC GGGCGCCGAC TTCGCCCACC TGCGCGTCCG GGTCCGCCTG GTCGACCCGC ACCTGGGCAG GGGCGGCCGG GTGTGGCGCA CCGACCAGTC GCCGCACCTG CTGATGAACA CCATCGCCTC GCAGGTGACC CTGTTCGCGG ACGAGACCGT CGACTGCGCG GGGCCGGTCG TGCCCGGACC GGATCTGCAC GAATGGGCGG GATTCGCCGC CCTCGCGGGC GAGTTCGACG ACCTGCCGGA GGCGGTCCGC GCCGAGGCCC GCGCGCTCGG GCCCGACGAC TACCCCACCA GGGCCTTCTA CGGGCACTAC CTGGACTGGG TGCTGCGGCA CCTGCTGCGC ACCGCGCCGC CCAACGTCGC CATCGAGTTG CACCAGCGGG TCGCCGTCGA CCTGGACGAG GACCCGGACG GCGTCCAGCA CCTGACCCTC GCGGGCGGCG AGCGGATCAC CGGCCTGGAC GCGGTCGTGC TCACCACCGG CCACGCCGAC CTGCGCCCGA CCGGCGAGGA GCGCGCGCAC GCCGAGTTCG CCCGCGCCCA CGGCCTGCGC TACCTGCCGC CGGACAACCC GGCCGAGACC GACCACGGGG CCGTCGAACC CGGCGAGAAG GTGCTGGTCC GGGGGCTGGG CCTGAACTTC TTCGACCACA TGGCGCTGCT CACCGCAGGG CGTGGCGGCC GGTTCGAGCG CCGAGCCGAC GGCACCCTCG CCTACCACGC GTCCGGCCGC GAGCCGCTCC TGGTCGCGGG GGCCCGCAGG GGCGTGCCGC ACCACGCGCG CGGCGAGAAC CAGAAGGGCC CGCGCGGCAG GCACGTGCCG CTGTTCCTCA CCGAGGAGCG TATCGCCGCG CTGGCCGGGG CCGGTCGCCC GCTGCGGTTC CTGGACGACG TGTGGCCGTG GATCGACGGC GAGGTCAGGG CGGTCTACTA CGCGGCGCTG CTGGCCGAGC GCGACGGACC CGGCGCGGTG GCCGGGTTCC TCGCCGAGTA CCGGCCGCTC GTGGAAACCG TGGGAGCGCT CTCGCACCTG GCCGCGGAGT CCCTGGACCT GGTGACCGCA CGACCCGGAG CGGGGACGAA CCCCTCAGGC GCGACCGCGA ACCCGCTGGG TGCCGCAGCG AATCCGCTCG GCCCGCCCGC GAACCCGCTC GGCCCGCCCG CGTATCCGCT GGGCCCGCCC GCGATCCCGG TGACCCTGGC CGAGGCCGAG GGCGAGCTGC TCGACGCCTG GTCCGTGCCG CGCGCCGACC GCTGGGACTG GGCCGCGCTC GCCGCCCCGC ACCGGGGTCG CGACTTCGCC CACCCCGAGC AGTTCCGCGA CTGGCTGCTC GGCCACCTGC GCGCCGACGT GCGCGAGGCC CGCCTCGGCA ACGTGCGCGG CCCCCTCAAA GCGGCCCTGG ACGTGCTGCG CGACCTGCGC AACGAGGTCC GCCTGGTGGT CGACCACGGC AGCCTCAGCG GCGACTCGCA CGAGGCCGAG CTCCAGCGCT GGTACACCCC GCTCAACGCC TACCTGTCCA TCGGCCCGCC GGTCGGCCGC ATCGAGGAGA TGATCGCCCT GCTGGAGGCC GGGGTGCTGG AGGTGGTCGG CCCCGGCGTC ACCGTCGAGC GCGACGAGCG GCGCGGCGAG TGGGTCATGG GCAGCCCGGC CGTCCCCGGC TCCCGGCACC GCGCCGGCGT GCTGCTGGAG GCGAGGCTCC CGGAGAGCGA CGTGCGCCGC ACCCTCGACC CGCTCGTGGA GTCCTTGCTG CGCAAGGGCT GCGGTGTCCC GTACCGCATC CCGGTCGACG GCGGCGGGCA CCTGGAGACC GGCGGGCTGG CCGTCACCCG CCGCCCCTAC CGGCTCGTCG AGCGCTCCGG CGCGGTCCAC CCGAGGCGGT TCGCCTTCGG CATCCCCACC GAGTCCGTGC ACTGGGCGAC CGCGGCGGGT GTGCGCCCCG GCGTGAACTC CGTCATCCTC GGCGACGCCG ACGCGGTGGC CAGGGCGAGC GTCCTGGCCG CCGACGCCCG CGCCGCCGAC GCGGTCGGGA GGAAGGGGAA CCGTGTTCGC TGA
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Protein sequence | MNLGFAGHAA ARVGAPAAGP ARGADAAVRV WSAESRDTEA NHMTGTESAP PSTTAPPRAS SANALEIAVV GVGPRGLSVL ERLCANAGAD FAHLRVRVRL VDPHLGRGGR VWRTDQSPHL LMNTIASQVT LFADETVDCA GPVVPGPDLH EWAGFAALAG EFDDLPEAVR AEARALGPDD YPTRAFYGHY LDWVLRHLLR TAPPNVAIEL HQRVAVDLDE DPDGVQHLTL AGGERITGLD AVVLTTGHAD LRPTGEERAH AEFARAHGLR YLPPDNPAET DHGAVEPGEK VLVRGLGLNF FDHMALLTAG RGGRFERRAD GTLAYHASGR EPLLVAGARR GVPHHARGEN QKGPRGRHVP LFLTEERIAA LAGAGRPLRF LDDVWPWIDG EVRAVYYAAL LAERDGPGAV AGFLAEYRPL VETVGALSHL AAESLDLVTA RPGAGTNPSG ATANPLGAAA NPLGPPANPL GPPAYPLGPP AIPVTLAEAE GELLDAWSVP RADRWDWAAL AAPHRGRDFA HPEQFRDWLL GHLRADVREA RLGNVRGPLK AALDVLRDLR NEVRLVVDHG SLSGDSHEAE LQRWYTPLNA YLSIGPPVGR IEEMIALLEA GVLEVVGPGV TVERDERRGE WVMGSPAVPG SRHRAGVLLE ARLPESDVRR TLDPLVESLL RKGCGVPYRI PVDGGGHLET GGLAVTRRPY RLVERSGAVH PRRFAFGIPT ESVHWATAAG VRPGVNSVIL GDADAVARAS VLAADARAAD AVGRKGNRVR
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