| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4648 |
|---|
| Symbol | |
|---|
| ID | 8328846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5534320 |
|---|
| End bp | 5535534 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644945094 |
|---|
| Product | protein of unknown function DUF201 |
|---|
| Protein accession | YP_003102326 |
|---|
| Protein GI | 256378666 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.896666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAA AGCGGCTGGT CGTCATCGGC AGCGGTGGTC AGGCGTTCCG GGAATACGCG
CTGGAGGCGA TGGCGGGCGA GGCCGACCTC GTGCTCCTGG AGAACCGGGA GCCCACCTGG
CAGAAGCCGC ACATCACCGA CTTCCGGGTG GTCGACCCGG CGGACGTGGC CGCGCTGGTC
GAGGCGGTGC GGGAGGTCGC GCCGGACGGG CTGCTGACCT ACGACGAGAG CCTGGTCGGC
ACGGTCGCGC TGGTCGCCGC CGAGGTCGGG ATCGCGCACA CCTCGCCCGA GGCGATCCGG
CTGTGCAAGG ACAAGTCCGC GCTGCGCGGG CACCTGGCCG AGGCCGGGCT GAGCCCGGTG
CGGTTCGCCG TGGCGCACAC CGGGCAGGAG GCCGTGGACG CGGCGGGGCG CATCGGGTTC
CCGCTGGTGT GCAAGCCGCT CGCGCTCGGC GGCAGCATCG GCGTGGTGCG GGCCGACGAC
GAGGCGGGGC TGCGCGAGGC GTTCGCGATC GCCGCGACCG CCAAGGCCGG GGACGGCACG
GCGTCCAAGC TCGCCGGCGT GCTGCTGGAG GAGTACCTGG AGGGGCCCGA GTTCAGCGTC
GACTGCGTGG TGTGGGACGG GGTCGCGCAC CCGCTGGTGG TGGCCGAGAA GGTGCTGGGC
TTCCCGCCGT ACTTCGAGGA GCTGGGGCAC GTGGTGCCCG CCGAGCCCTC GCCCGCGATC
GACGAGGCGG TGCGGCTGGT GCGCGAGGCG CACCGGGCGG TCGGGCTGGA CCGGCTGGTC
ACGCACACCG AGTTCCGGCT CACCCCGGAC GGGCCGCGCA TCATCGAGAT CAACGTGCGC
CTGGGCGGCG ACCTGATCCC GCTGCTGGGC AAGCTGGCCA GCGGGGTGGA CCTTGCCGCG
TCGGCGGCGC GGGTGGCGGT GGGGCTGGCC CCGGAGACCG GGCCGCTGCG CTCGGAGGTG
GCCGCGATCG TCATGGTGTA CCCGGACCGG GCCTACCGGG TGGAGGGCGT GCGGCTGCGC
CGCGACGAGG CCGAGTACCC CGGTCTCGAG CGGCTGACGA CGTTCCTGCC GCCCGGCACG
GAGGTGCGGC TGCCGCCGGA GGGCTTCCTG TCCCGGCTGG GCTTCGCGAT CGTCACGGGC
GCGGACCGGC GGGAGTGCCT GGAGCGGCGG GACGCGGTCG CGGCCGACCT GGTGGTGGAC
GGGACGCCGC TGTGA
|
|---|
| Protein sequence | MSEKRLVVIG SGGQAFREYA LEAMAGEADL VLLENREPTW QKPHITDFRV VDPADVAALV
EAVREVAPDG LLTYDESLVG TVALVAAEVG IAHTSPEAIR LCKDKSALRG HLAEAGLSPV
RFAVAHTGQE AVDAAGRIGF PLVCKPLALG GSIGVVRADD EAGLREAFAI AATAKAGDGT
ASKLAGVLLE EYLEGPEFSV DCVVWDGVAH PLVVAEKVLG FPPYFEELGH VVPAEPSPAI
DEAVRLVREA HRAVGLDRLV THTEFRLTPD GPRIIEINVR LGGDLIPLLG KLASGVDLAA
SAARVAVGLA PETGPLRSEV AAIVMVYPDR AYRVEGVRLR RDEAEYPGLE RLTTFLPPGT
EVRLPPEGFL SRLGFAIVTG ADRRECLERR DAVAADLVVD GTPL
|
|---|
| |