| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4621 |
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| Symbol | |
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| ID | 8328819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5503602 |
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| End bp | 5505095 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644945068 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003102300 |
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| Protein GI | 256378640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCGAC GTGCCGATCA GGTTTCCGGG TCCCCCACGG CAGCACCCAG ACCGCTCGCG
CTGGTGGTGG CCGCGCTCAC CGCGCTGGCC TGCCTGGCCG CGCCAGCGCC CGAGGCCCGC
GCCGCGACCA ACCAGTTCCG GGGCGTGAAC TGGGCCGTGC TGGGCGACAA CTTCAGCACC
ACCGCGCTCG TCCCCCAGGG GCTCAGCCGG TCCGACAGCA ACGCGACCGT GCGCGCCAAG
GCCAACGCCC TCTACGACGA CCTGGCCGCC ACCCTCGGCG TCAACACCGT GCGCCTGCCC
GTGAACACGC ACACCGTGGC CGACACGACC TGGTGGAACG CCTACCGGGG CGCCATCGAC
GCCGCCACCG CGCGCGGGTT CAAGGTGATC CTCGCCTACT GGGAGGACGG CGCGGCCTCC
GGCGGCCGGA TCACGAACAC CTCGGCGTGG AACAGCATGT GGGCCACCGT GGTCGGCGCG
TACGCGTCCC ACGGCGGCGT GTACTTCGAG CCGATGAACG AGCCGCACGG CTACACCTCC
GCGCAGTGGC GCGACGTCGC GGCGGGCTGG CTCGCCACCC ACGCCTCGGC CCCGCCCGGC
CGGGTGCTGA TCGGCGGCAC CGGGTACAGC CAGGACCTGC GGGACGTGTG CGGCGACAGC
AGGTTCGCCT CGACGCTGCT GTCCTTCCAC CACTACGCGT TCTTCTACGA GGCGATGACC
TACGACGCCT TCCGCGGCCA CATCCAGACC CGTCTGGGCA GCTGCGCCTC GCGCGCGGTC
GCCACGGAGT TCGGCGCGCC GATGTCCACC GGGCTCGACT ACGGCAACGC GGGCAGCACC
GACAACTTCG TGCGCCACAT CCGCGCCATG GCGCAGGTGA TGCGCGACAA CGGGATGGGC
GGCACGTACT GGCCCGCGCT GGGCGGCAAG CCGACCGGGA ACCTCGGCTA CGACTCGTAC
TCGCTGTACG CGCTCAGCGG CGGCGGGACC GACCTGAACC TGACCGTCCG CAACGCCTCC
GGGGCCGACC GGCTGCGGTA CGCCTGGGGT GACGGGTCGA CGCCGCCGAC CACGAACTAC
CGGGTCGACG TGCGGCACAG CGGCAAGTCC ATGGACGTGC AGCAGCCGAA CGGCGACAAC
GGGGCGCGCG TCGGGCAGTA CGCGTACGGC GGGAACCCCT GGCAGCAGTG GCAGTTCCAG
GACGCGGGCG GCGGGCACTG GCGGATCGTG AGCCGGAACA GCGGGCGGTG CCTGGACGTG
GTGAGCGCGT CGACGGCGGA CGGGGCCGAA CTGGTGCAGT ACACCTGCGG GAGCGGGACG
AACCAGGAGT TCCAGCTGGT CGCGTCCGGG AGCCACTTCC AGCTGAAGGC CCGGCACAGC
GGCAAGTGCG TGGACGTCCC GTCCTCGTCG ACGGCCGACG GGGTGGTGCT CAAGCAGTAC
CCGTGCAACG GCGGGGCGAA CCAGCAGTGG ACGCGCACCG CCGTGACCGG CTGA
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| Protein sequence | MDRRADQVSG SPTAAPRPLA LVVAALTALA CLAAPAPEAR AATNQFRGVN WAVLGDNFST
TALVPQGLSR SDSNATVRAK ANALYDDLAA TLGVNTVRLP VNTHTVADTT WWNAYRGAID
AATARGFKVI LAYWEDGAAS GGRITNTSAW NSMWATVVGA YASHGGVYFE PMNEPHGYTS
AQWRDVAAGW LATHASAPPG RVLIGGTGYS QDLRDVCGDS RFASTLLSFH HYAFFYEAMT
YDAFRGHIQT RLGSCASRAV ATEFGAPMST GLDYGNAGST DNFVRHIRAM AQVMRDNGMG
GTYWPALGGK PTGNLGYDSY SLYALSGGGT DLNLTVRNAS GADRLRYAWG DGSTPPTTNY
RVDVRHSGKS MDVQQPNGDN GARVGQYAYG GNPWQQWQFQ DAGGGHWRIV SRNSGRCLDV
VSASTADGAE LVQYTCGSGT NQEFQLVASG SHFQLKARHS GKCVDVPSSS TADGVVLKQY
PCNGGANQQW TRTAVTG
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