| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4616 |
|---|
| Symbol | |
|---|
| ID | 8328814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5499190 |
|---|
| End bp | 5500044 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644945063 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003102295 |
|---|
| Protein GI | 256378635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.400751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACC GCTTCACCCG ACTGCTGGCC GCGTCCGGCG CGGCGCTCGT GCTCTCCGCC
CTGGCGACGG CCCCCGCGCA CGCGCTGGTC GACTGCGCGC CCGACCCGTG GGAGATCGAC
GACGTCCCCG GCGCGGCGGC GGCCCCGATC GCGCCGGGCG AGACCGCGCA CCGGGCCATC
TGCCAGGAAC GCGACCCGCT GCCCGGCAAG ACGCAGGCGC GGGACGTCGA CTGGTTCGAG
TTCACCGCCG TCGAGGGCCA GGCCTACACC GCGGAGGCCG TGCAGGTCGG CGCGGGCCTG
GTCAACAACG CCGACCGGGG CGGGCTCGGC GTCGGCTTCC ACCGGGTCGA GGCGGACGGC
TCGCTGACCT CGGTCGAGCA GAACACCAGC CCCAACGGCG ACCGCTCCAC CAGCGTCCCG
CTGAGCGCGG GCGCCTACCG GATCGGGGCG GCGACCAGCG ACCAGCAGGT GTACCCGAAG
GACAACGTGC TGGCGACGAA GACCGTCCAG GGCGCGGACG GCCTGTACGG CATCCGCCTG
ACCGCGACCG CGCCCCCGCC GGTGCTGTCG TCGCTGACGA TCAGCCCGAA CGCCGTCAAG
GGCGGCGACA CGGCCACCGC CACCCTGGTG TTCAGCAGCC CGGTCCTGAA GGGCGGCACG
TACTTCTCCC TCTCCAGCAA CGATTTGTAC GTCGCCAACC CGACGGGCAG CCGGGTCGTG
CCGGAGGGCA CGACGACGGT GAAGATCCCG GTGAACACCC GCCGCGTCCC GGCCGACACG
CCGGTGACGT TCACCGGCCA GGTGGTGTGG GTCGGCGACC GGCTGACCGA CGTGCTGACC
GTGCACGGCG GCTGA
|
|---|
| Protein sequence | MRNRFTRLLA ASGAALVLSA LATAPAHALV DCAPDPWEID DVPGAAAAPI APGETAHRAI
CQERDPLPGK TQARDVDWFE FTAVEGQAYT AEAVQVGAGL VNNADRGGLG VGFHRVEADG
SLTSVEQNTS PNGDRSTSVP LSAGAYRIGA ATSDQQVYPK DNVLATKTVQ GADGLYGIRL
TATAPPPVLS SLTISPNAVK GGDTATATLV FSSPVLKGGT YFSLSSNDLY VANPTGSRVV
PEGTTTVKIP VNTRRVPADT PVTFTGQVVW VGDRLTDVLT VHGG
|
|---|
| |