| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4603 |
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| Symbol | |
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| ID | 8328801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5467710 |
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| End bp | 5470019 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 644945050 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102282 |
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| Protein GI | 256378622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.508035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCCGG CGGGCGAGGT CCGCCGGGCG CTGAGCCCGA TGGAGCGCTG GTACTGGGTC
TGCGACCGGC TCTCCGCGCT CAACGTCGTC GCGCGGGTCC GGGTGCTCGG CCCCTGCGCG
ACCGCCGACC TGGAGCGGGC CGCCGCGACC CTGGTCCGGC GGCACCCGCT GCTGCGGGTG
GCCGTCGCCG CCGACCCCGA GCCGCGCTTC GTCCCGGCGA CCGGTCCCCG CGTCCCGGTG
CGCCGCGTCG AGGCCACCCG GCCCGACCAG TGGCAGCACG AGGTCGACGA GGTCGAGCTG
GCGACCCCGC TGGACCACCG CGCGGGCCCG CTGATCCGGG TGGTCCACAT CCGGCACGGC
CGGGGCGCGC ACGGGCACGG CGAGCACGGG CACGGCGCGC ACGGGCACGG CGAGGACGAG
CACGGCCCGG ACGAGCACGA CGTGGTGCTC ACCGCCTCTC ACGTCATCGC CGACGGCACC
ACCGCCCTGG CGCTGCTGCG GGAGCTGGTG GAGCAGGCCG CCGCCCCCTC GGACGCCCCG
CCGCGCGCCC CGCTGCCCCC GCCCGAGGCG CTGCTGCCCG CGCGGGTCAA CGGTCTGCCC
AGGGCGGTGC ACCTGGTCGC GCTCTCCCTG GCCGATCAGC TCGCCGCCGC CCTCGCCCGC
CCCCGGCGGC TCGCGCCGGG CACCTCGGTG CCGCCCACCC GGCGGCGCAC CCGGCTGCTG
CACCGCGAAC TCGACCCCGC GACGCTGACC CGCCTGGTCG ACCGCTGCCG CGCCGAGGGC
GTGACCGTGC ACGGCGCGCT CACCGCCGCG CTGGCGCTGG CCGTGGCCGA CGAGGGCGGG
ACCCGGACGG CGCGGAGGGT CACCATCGGG TCCCCCGTGG ACTTCCGCGC CGACCTCGTC
CCACCGGTCG ACCCCCTGGA CGCGGGCGCC TACGTGGCCA CCGTCCCCTC GCACGTGCGG
GTCGAGCCGG GCGACCTGTG GCGCACCGCC CGAGGCGCCC AGCGGGACCT GCGCCGCCGC
AGGCGCCTCC ACCACCACCT CGCGCTGGTC TCCCTGCTGC GGTTCATCTC GCCCCGCTCG
GTCGAGGGCA GCGCCGGGGT CGTCGCGATG ATCGACCGGT CGGGGCCGGG CAACGTGTGC
CTGTCCAACC TCGGCCGCCT CGACTTCCCC GACCGCGCCG GGACGTGCGC GCTGTCCGGG
GCGCAGTTCG CCGCGGGCAT CTCGGTCAGC GGCTACCTCG TGGCCGCCGT CAGCACCAGC
CACTCGGCGC TGCACTGGAA CTTCACCCAC GTGGCCGACG CCGTCGACCA CCGGCGGGCC
GAGCGCCTGG CCGACCGGGC GGTGGGCGCC CTGCGGTCCG CCCTCACGAC ACCGCCGGGC
CCCGCCCGGC GCCGGAACGA GAGGTCGACG ATGGCGAAGA GCGGAAACCG GGGCGCGGTC
GTGCTCACCG GGGCGTCGTC CGGGCTCGGC GAGGCCGCGG CGCTGGCGCT GGCCCGCGCC
GGGTTCACCG TGCACGCGGG CGTGCGCTCC GAGGACGCCG CGGCCCGGCT CGCGCGGGCG
CACCCGGCGA TCCGGCCGCT GCTGCTCGAC GTGACCGGGG AGGACTCGGT GGCCGCCGCG
GGCGCCGAGG TCCGCCGGGA GGTCGGCGAG GCCGGGCTGG TCGGCCTGGT GAACAACGCG
GGGATCTGCG TGTCCGCGCC GCTGGAGTGC GTGCCGCTGG ACGACCTGCG CGCCGAGCTG
GAGGTCAACC TGATCGGCGC GATCGCGGTC ACCCAGGAGT TCCTGCCGCT GCTGCGCACC
AGGGCGCGGG GCGCGCCCGA CGGGCCCGCC GGGCGGATCG TCAACGTCAG CTCCGGCATC
GGCCGGGTCG CCGCCCCGTT CCTCGGCCCC TACGCCGCGT CCCAGTTCGC CAAGGAGGGC
GTCTCGGACG CGCTGCGCCG CGAGCTGGCC CCGCTGTCGG TCAGCGTGTC GGTGCTGGAG
CCCGGCGCGG TCATGACCCC CATCTGGTCC AAGGTGGCGG TCGCCGCCCG CGACGTGCTC
GACAAGGCGC CCGCCGAGGT GGCCGCGCTG TACCGGGCGC GGTTCGAGGC GTTCGTGGCC
GCCAACGAGG CGCGGGCGCG GGGCAGCCGC ACCCGGCCCG AGGCCGTCGC GGCGGCCGTC
GTCCACGCCA TGACCGCCCG CCGCCCCCGC ACCCGCTACC GGGTCGGCCC GGACGCCTGG
ACCGCCTCGG TGGCCGCCCG CGCGCTGCCC GACCGGGTGC TGGACTCGGT GATCCGCCGC
CAGTTCCGCG CGGGGGAGGG GCGGTCGTGA
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| Protein sequence | MTPAGEVRRA LSPMERWYWV CDRLSALNVV ARVRVLGPCA TADLERAAAT LVRRHPLLRV
AVAADPEPRF VPATGPRVPV RRVEATRPDQ WQHEVDEVEL ATPLDHRAGP LIRVVHIRHG
RGAHGHGEHG HGAHGHGEDE HGPDEHDVVL TASHVIADGT TALALLRELV EQAAAPSDAP
PRAPLPPPEA LLPARVNGLP RAVHLVALSL ADQLAAALAR PRRLAPGTSV PPTRRRTRLL
HRELDPATLT RLVDRCRAEG VTVHGALTAA LALAVADEGG TRTARRVTIG SPVDFRADLV
PPVDPLDAGA YVATVPSHVR VEPGDLWRTA RGAQRDLRRR RRLHHHLALV SLLRFISPRS
VEGSAGVVAM IDRSGPGNVC LSNLGRLDFP DRAGTCALSG AQFAAGISVS GYLVAAVSTS
HSALHWNFTH VADAVDHRRA ERLADRAVGA LRSALTTPPG PARRRNERST MAKSGNRGAV
VLTGASSGLG EAAALALARA GFTVHAGVRS EDAAARLARA HPAIRPLLLD VTGEDSVAAA
GAEVRREVGE AGLVGLVNNA GICVSAPLEC VPLDDLRAEL EVNLIGAIAV TQEFLPLLRT
RARGAPDGPA GRIVNVSSGI GRVAAPFLGP YAASQFAKEG VSDALRRELA PLSVSVSVLE
PGAVMTPIWS KVAVAARDVL DKAPAEVAAL YRARFEAFVA ANEARARGSR TRPEAVAAAV
VHAMTARRPR TRYRVGPDAW TASVAARALP DRVLDSVIRR QFRAGEGRS
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