Gene Amir_4590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4590 
Symbol 
ID8328788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5453084 
End bp5454121 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content72% 
IMG OID644945037 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_003102269 
Protein GI256378609 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0142307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCAC AGGCAGGCAG CGTGTTCGAC GGCATGACGC TCGACCACAC CGTGTTCTAC 
GTCGGCGACG CGGACCGCGC GGCGGGCGAG CTCACCGACA AGTACGGGCT GGTGGTGCTC 
GGCACGTCCG AGACCTCGTC GGTGCGCTCG GTCGCGGTGG GCGGCGGCTC CATCCGGCTG 
GTGTTCTCCC AGGCCATCGC CGACGACACC CCGGCTGCCG CGTACGTGAA GGTGCACGGC 
GACGGCGTGG CCGACCTCGC GCTGGGCGTC GCCGACGCCC GCGCCGCGTT CGCCGAGGCG 
GTGCGGCGGG GCGCGCGGCC GGTGGCCGAG CCCACCGAGG CCGACGGCGC GGTGCTCGCC 
ACGATCATGG GCTTCGGCGA CGTGGTGCAC ACCTTCGTCC AGCGCCCCGG CGGCGCGCCC 
GGCGAGGACC CGGAGAGCGC GGGCGGCCTG CGCGTGCTGG ACCACTTCGC GGTCTGCCTC 
GAGGCGGGCG GGCTGGAGCC GACCGTGGCG TTCTACCAGG AGGTGCTGGA CTTCCGGGTG 
GTCTTCGAGG AGAAGATCGT CGTCGGGGCG CAGGCGATGA ACTCCAAGGT CGTGCAGAGC 
ACGTCCGGCG CGGTCACGCT GACCCTCATC GAACCGGACA CCTCGCGCAA GCCCGGTCAG 
ATCGACGACT TCATCAAGAA CCACGGTGGC GCGGGCGTGC AGCACATCGC CTTCGCCACC 
GACGGCATCG TGGACGCGGT GCGCCGGTTG CGCGAGCGGG GCGTGGAGCT GCTCACCACG 
CCCGCCGCCT ACTACGACCT GCTGGCGGAC CGCCTCGGAC CGACCCGGTA CTCCACGGCC 
GAGCTGGCCG AGCTGAACCT GCTGGTCGAC GAGGACCAGG ACGGCAAGCT GTACCAGATC 
TTCGCCCGGT CCACCCACCC CAGGGGCACG TTCTTCTTCG AGATCATCGA GCGCGCGGGC 
GCGCACACCT TCGGCAGCGG CAACATCAAG GCCCTCTACG AGGCCGTCGA GGCCGAGCGC 
CACCGGACCG AGCGCTGA
 
Protein sequence
MAAQAGSVFD GMTLDHTVFY VGDADRAAGE LTDKYGLVVL GTSETSSVRS VAVGGGSIRL 
VFSQAIADDT PAAAYVKVHG DGVADLALGV ADARAAFAEA VRRGARPVAE PTEADGAVLA 
TIMGFGDVVH TFVQRPGGAP GEDPESAGGL RVLDHFAVCL EAGGLEPTVA FYQEVLDFRV 
VFEEKIVVGA QAMNSKVVQS TSGAVTLTLI EPDTSRKPGQ IDDFIKNHGG AGVQHIAFAT 
DGIVDAVRRL RERGVELLTT PAAYYDLLAD RLGPTRYSTA ELAELNLLVD EDQDGKLYQI 
FARSTHPRGT FFFEIIERAG AHTFGSGNIK ALYEAVEAER HRTER