Gene Amir_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4576 
Symbol 
ID8328774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5422067 
End bp5423161 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content79% 
IMG OID644945028 
Producthypothetical protein 
Protein accessionYP_003102260 
Protein GI256378600 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGGGA ACCGGAGCCT GATCGCGATC GCCGAGCGGG CCGATGCGGC GCTGCGCCAG 
GCCCCGCAGG CCCGGCGCCC GCCGGGCCGC CTGGTCCCCC TCGACACCCA CCGGCGGCTG
CACGTGGTCG AACCCGACCA CCTGGACGAG GACGGAACAC CGCGCCGGGT GAGAGGTTCG
GCGCGCACCG ACCGGCTGCG CCTGGTGACG CTCCCGGTGC TGGGCGCGCT CGCCCTGGAG
ATGCTGCCGG TGCTGCGGGA GCTGACCGGC CGGGTGGAGG GGGTGTGGGC GATGGCCTAC
GACCGCGCCG GGATGGGCTG GAGCCCGGCC GCGCCCGGCG GCCTGGCCCC CCGCACCCCG
ACCGCCCTGG CCGCCGAGCT GCTGGAACTG CTGGACGCGC TCGACCGGCA GGACGGGCGG
CTGCCGGTGG TGCTGGTCGG GCACTCGCTG GGCGGGCTGG TCGCGCGCGC GGCGGCGGCG
ATGTGCCCGC CGGGCAGGAT CGCCGGGATG GTGCTCATCG AGCCCTCCCA CGAGGACGCG
CGGGCGGCGC TGGCCCCGCT CGACCGGGCC GTGACCCTGC GCCGGCAGGT GCGGGCGCTG
GGGTCGCGGC TGCTCGGGAC CACCGGGTGG TGGCGGGCGC GGGCGGTCGT CACCGGGGCC
GGGATGCACC CGCCGCAGGC GGCGGTGTTG CCCGCGGCGT GGCGGGCGCG GGCGGCCTGG
CGCGTGCGCG GCCCCGCCCA CCAGGCCGCG TGGCTGCGCG AGAGGGCGGG GGTGCTGAGC
GGCGCCGCCG CCGCGCGCGG GCTGCCCGAC CTCGGCGACC TGCCGCTGTG GGTGCTCTCC
CGCACCGAAC CCGGCCCGGC GAAGGCGATC TGGCGGGGCC TGCACGAGCG CACCCGGCGG
CTGTCCACGG CCGGACGGCT GCTGCCGATG CCGGAGGGGA TCGGCCACTT CCCCCACTAC
GAACGGCAGG GCCACGAGTA CCTGGTGGCC ACGTTGGAGA GCTTCGTGCG CGCGCTGGTC
GAGCAGGGCG GGGCGTCCGC GACGGCCGAC GTCCCCGCGG CGATGACGCC CGGCGCACTC
GACGCCACGC AGTGA
 
Protein sequence
MSGNRSLIAI AERADAALRQ APQARRPPGR LVPLDTHRRL HVVEPDHLDE DGTPRRVRGS 
ARTDRLRLVT LPVLGALALE MLPVLRELTG RVEGVWAMAY DRAGMGWSPA APGGLAPRTP
TALAAELLEL LDALDRQDGR LPVVLVGHSL GGLVARAAAA MCPPGRIAGM VLIEPSHEDA
RAALAPLDRA VTLRRQVRAL GSRLLGTTGW WRARAVVTGA GMHPPQAAVL PAAWRARAAW
RVRGPAHQAA WLRERAGVLS GAAAARGLPD LGDLPLWVLS RTEPGPAKAI WRGLHERTRR
LSTAGRLLPM PEGIGHFPHY ERQGHEYLVA TLESFVRALV EQGGASATAD VPAAMTPGAL
DATQ