| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4553 |
|---|
| Symbol | |
|---|
| ID | 8328751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5400713 |
|---|
| End bp | 5401804 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644945006 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_003102238 |
|---|
| Protein GI | 256378578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.569838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCA CAGGGCGACC GAAGGCCGAG TTGGTGTTGG GCCAGGACGA GCGGGCGGCG
TTGGAGGGCT GGGTGCGGCG TCGGTCGACG CCGCAGGCGT GGGCGTTGCG GTGTCGGATC
GTGCTGGCGT GCGCGGAGGG CGCGACGAAC AAGGACGTGG CCGCCCGGTT GGGTTCCACG
CCGCACGCGG TGGGCCGGTG GCGGGCCCGG TTCCTGCGGT ACCGGATCGC GGGTTTGGGC
GACATGCCCC GGTCGGGCGG TCCGCGCAGG ATCGATGACG GGCAGGTCGC CGAGCTGGTC
GCCGCGACGC TGGAGCGCAG GCCGGACAAC GCGACCCACT GGTCCACCCG GTCGATGGCC
GAGCGGACCG GCCTGTCGCA GTCGACGGTG TCCCGGATCT GGCGCGCGTT CGGCCTGCAA
CCGCACCGTG TCGAGACGTT CAAGCTGTCC ACCGACCCGT ATTTCGTGGA CAAGGTGTAC
GACGTGGTCG GCCTCTACCT CGACCCGCCC GAGCGCGCCC TGGTGTTCTG CGTCGACGAG
AAGTCACAGA TCCAGGCGCT TGACCGGTCC CAGCCGGTGC TGCCCATGAT GCCCGCAGTC
CCCGAACGGC AGACCGCCGA CTACGTCAGG AACGGGACCA CCACCCTGTT CGCCGCGCTC
GACGTGGCCA CCGGGAAGGT GATCGGCTCG CTCAATCGCC GCCACCGCAC GGAGGAGTTC
AAAGCCTTTC TGTCCACACT GGACAAGGAA GTGCCTGCGG GGCTTGAGGT CCATCTGGTC
TGCGACAACT ACGCCACCCA CAAGACCCCG GCGGTCAAAC GGTGGCTGGT CTCCCATCCC
AGGTTCCACC TGCACTTCAC CCCGACCGGC TCCTCGTGGC TGAACCTGGT CGAGCGCTGG
TTCGCCGAAC TGACCACGAA ACGACTCCGA CGAGGCGTCC ACACCTCGGT TCAGGCGCTG
GAGACCGACA TTCGCGACTG GATCGCCGCC TGGAACAGCA ACCCGAAGCC CTACGTTTGG
ACCAGAACCG CAGACCAGAT CCTCGAACGC CTCGCCGGAT ATCTGAACAG AATTCCTGAC
TCAGGAGACT AG
|
|---|
| Protein sequence | MARTGRPKAE LVLGQDERAA LEGWVRRRST PQAWALRCRI VLACAEGATN KDVAARLGST
PHAVGRWRAR FLRYRIAGLG DMPRSGGPRR IDDGQVAELV AATLERRPDN ATHWSTRSMA
ERTGLSQSTV SRIWRAFGLQ PHRVETFKLS TDPYFVDKVY DVVGLYLDPP ERALVFCVDE
KSQIQALDRS QPVLPMMPAV PERQTADYVR NGTTTLFAAL DVATGKVIGS LNRRHRTEEF
KAFLSTLDKE VPAGLEVHLV CDNYATHKTP AVKRWLVSHP RFHLHFTPTG SSWLNLVERW
FAELTTKRLR RGVHTSVQAL ETDIRDWIAA WNSNPKPYVW TRTADQILER LAGYLNRIPD
SGD
|
|---|
| |