| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4550 |
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| Symbol | |
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| ID | 8328748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5393882 |
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| End bp | 5397004 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644945004 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_003102236 |
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| Protein GI | 256378576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCG ACATGCGTAT CCGGGTCTCA CAGATCATGG CCGATGGCGG GCCGGTACTG
CGCGCCAAGG CGCAGGAGGC GCTGACGGCG GGCGACGAGG CGATCCTGCG GTTCGTCGAG
GTCGGGCAGC ACGCAGCGCG CGAGGACGAC GACCGGGTTC GCATCACGCA GATCATGGCC
GTAGGCGGAA TGGCAACCAG GGAAGCCGCC CAGCGCGCGC TGCAGGGCGA GGCAGAGGAT
CTGCGCGAGT TCCTGATCAC TGGTCAGCAC GTGGCCCGCG CCCGCGACGA GGAGCTGGCC
ACCGTGCAGC AGCTCACCGA CCAGGCCGCC GAGGCGGGCC GCATCGCCAC CGAGGAGACC
CGGCTCGCCG AGGAGCAGTC GGCGCTCGCC GTCGAGGCAG CCCGGCTGGC GAAGCTGGCG
GCCGAACGGG CAGCAGCAGA AACCGCTGCG GCACAGCAAG CTGCAGGCAA AGCCGCCGCA
GCGGCGGCGC GTGCGGCGGA CGCGGCGACC AGGGCGGCGT CCGCCGCGAG AGTGGCGACC
GACGCCGCTG CGGCGGCGAA CCGGGCTGCC CGGTCGGCGA CGACTGCGGC GGCCCGTGCG
GCGCAACTGG CAGCCTCAGC CGGGCAGGCC GCTGCGGTCG CCTACGGTGC CGCGTCGGCC
GCCGCCACCG ACGCGAGCCA GGCGAGCGCA GCCCGGAGGG CCGCCGAGCA GGCTCGGCTG
CTGGCACAGA CCGCCCGGTT GGCCGCACAT GCAGCCGGGG CCGCCGGTGA CGCCGCCAAC
GCCGCGAACG CGGCGGCCTC GGCGGCCGCC AGCGCTGGGC GCAACGCCGA CGCGGCCGCG
AACGCCGCCG CCGAAGCGGG TAACTACTCG CATGCCGCAG GTGCTGAAGC AGACCGGGCA
CGGGCCCAGG CTGCTGAGGC GAAGCGCCAG GCAGCCTCCG CTGTCCGGGC GGCAGGCACG
GCGGGCACCT GGGCACAGCG GGCCGTGACT GCCGCCAGGG AGTCCAAGAC CGCAGCCCTG
GAAGCGGCAA CCCGCGCGGA AGCTGCTGCG GCAGCCGCAG AAGAAGCCGC CGCGCACGCG
GGCGAAGCAG CACAGGCGGC GGCACGGGCG ACCGCGCACG CCGAAGCCGC CGCGACCGCC
GCCGCGGATG CCACTGCTGC GGCCGACCGG GCCGCCGCCG TGGAACAGGC GGCCAGGGAG
GCCGAGACGG CCCGGCTGGC CGAGGCGACC GCGCAGGCGA TGAGCGAAGC AGAGGCAGCG
AAGGCAGCGT CGGCCGGGTC CGCGCCGATT CCCTGGGACA CACTGGAGTC CGACCGGGTC
GATCAGCAGA CGAACATGCT GCTGGCCGCC GCGTCCGCAG CGGGTGCCAC CGACGAGACC
GTGCTGGGCA ACGGCCGCCG CGCGGCGGTC CGACTGCTCC GGTCAGGTGG CCCTTGGACG
CGGGCGGCGG CGGCCGAGGC TGTGGTCGGC GATGTGGCCG GGATGCGGCA GTGGTTGGCG
GCGACCCTGC CTTCCGCTGC CGAGCAGGAC GACCGGGCAC GGGTGGCGCA CCTGGCAGCG
ACCGGGACCC CTGCCGCGCT GCGCACTGCG GCGACGGCGG CGCTGACGGG CTCTGGCGAG
GACGTGCGTG CCTTCCTGCG TACCCGGTCC TACAGCGGGA AGGAGACCGA CGACAGGATC
GCGGTGTCCC AGGCGATGGC GGCGGGTGGC GCGGCGGTGC GGGCCGCCGC GCAGACGGCT
TTGCGCGGTA CGGCGGCCGA GGTGGACGCG TTCCTGCGGA TCGGACTGGC GGCCGCGAGG
GAGACCGACG ACCGCATCCA GACATCCCAG GTGATGGCGG CCGGTGGTGC CGAGGTGAAG
GCGGCGGGGC AGGTGGCGCT CGCAGGTCCG CCTTCCTATC TGCGCGTTTA CCTGGAGGTG
GGGCAGCACA AGGCCCGGCA GCGCGACCTG GAAGCCGCCA CTCACGTGAC CAGGGTGCGC
GGACTGACGG CCGAGGCCGC GAGGATAGCC GCGACGGCGC GGGCGAACGC GGCTGAGGCG
GCACGGGTGG CGGCCGTCGC CCGGCAGGCG GCCGCCGAGG CAGCCGAGCA CTCTGCAAGG
GCGCAGGCTG CGGCCAACCA GGCCGCCGGG TACGCGCAGC AGGCGGCGGA CTCGGCGGCG
CAGGCGAAGC AGTCCGCCGA TCAGGCTGCT ACGGCGGCGC AGTCGGCCAG GGCAGCGGTG
GCGTCGGCGC GGCAGGCAAG CGCGACGGCC GCCGCTGCGG CCGCAGCGGC GGAGAAGTCG
GCGCGGCAGG CCGCCTTCAC GGCAGAGGTC GCGCAGTGGG CGGCAACCAA GGCCAGGGAG
TCGGCGAGCG CTGCCGGACT GGACGCCTAC GCGGCGGCGC AAGCGGCGCA GGCGGCGTAC
GCGGCCTGGG TCGACCTCCA GCGGCGCCAG TCAGCACCGG GTGTGCCGAA CTGCGAGACA
GGTTGGGCGC GGCCCGACGG CGTCTGCCTG CCAACCACAC CAAGCCAGGG CTCGGGACCC
GAGCCGATCA ACAACCCGGC CCTCCCGGCG CACGTTCACG ACGGTGGCCA GGACGCACTG
CAGGTCCTGC TGTACATGCT GCGCGAGATG CAGGTCAATC CGGATGACCC GGCGTTGAAC
GCTATCCGGG CGAACGTGAA CAAGCCGTGC GTCCTCGGCC GGGAGGGCTG TCACACTGCG
GCCCTGCTGT TCTTCGCCAT GCTCGTCCGT CCCGACGGGC GGTGGGACCA CAAGCCGATG
ATCCGGGGGA TGCTCGGCAT GGGCCCCGAC GATTACTGGT ACACCGATAT TCCCGGCATG
AACGCCGGGC TCTACATCGA TGTCTGGTCC AACATCCACT ACGGGTACAT CGGGCACCTC
GTCGGTTTCA CCGAGAGTGA TCTCCAGTTC TACCCGAGGC TCACGGGAAT CTCAGGCCGC
AACGACCAGG CTGACGTGAT CACCATTCAG ATCGGCATCG ACCTCGCGAA GCGGTACCGG
CCTGAGGAGC TGACCCCGGA GGTCCTCACC CAGGCGATCA TGGCCAAACT CCCCGCGCTT
GCCGCAGCCA CCGATGGCCA CGTCCGCCCG TTCCGCAACC AACCGCAGTC GAACCAAACC
TGA
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| Protein sequence | MTSDMRIRVS QIMADGGPVL RAKAQEALTA GDEAILRFVE VGQHAAREDD DRVRITQIMA
VGGMATREAA QRALQGEAED LREFLITGQH VARARDEELA TVQQLTDQAA EAGRIATEET
RLAEEQSALA VEAARLAKLA AERAAAETAA AQQAAGKAAA AAARAADAAT RAASAARVAT
DAAAAANRAA RSATTAAARA AQLAASAGQA AAVAYGAASA AATDASQASA ARRAAEQARL
LAQTARLAAH AAGAAGDAAN AANAAASAAA SAGRNADAAA NAAAEAGNYS HAAGAEADRA
RAQAAEAKRQ AASAVRAAGT AGTWAQRAVT AARESKTAAL EAATRAEAAA AAAEEAAAHA
GEAAQAAARA TAHAEAAATA AADATAAADR AAAVEQAARE AETARLAEAT AQAMSEAEAA
KAASAGSAPI PWDTLESDRV DQQTNMLLAA ASAAGATDET VLGNGRRAAV RLLRSGGPWT
RAAAAEAVVG DVAGMRQWLA ATLPSAAEQD DRARVAHLAA TGTPAALRTA ATAALTGSGE
DVRAFLRTRS YSGKETDDRI AVSQAMAAGG AAVRAAAQTA LRGTAAEVDA FLRIGLAAAR
ETDDRIQTSQ VMAAGGAEVK AAGQVALAGP PSYLRVYLEV GQHKARQRDL EAATHVTRVR
GLTAEAARIA ATARANAAEA ARVAAVARQA AAEAAEHSAR AQAAANQAAG YAQQAADSAA
QAKQSADQAA TAAQSARAAV ASARQASATA AAAAAAAEKS ARQAAFTAEV AQWAATKARE
SASAAGLDAY AAAQAAQAAY AAWVDLQRRQ SAPGVPNCET GWARPDGVCL PTTPSQGSGP
EPINNPALPA HVHDGGQDAL QVLLYMLREM QVNPDDPALN AIRANVNKPC VLGREGCHTA
ALLFFAMLVR PDGRWDHKPM IRGMLGMGPD DYWYTDIPGM NAGLYIDVWS NIHYGYIGHL
VGFTESDLQF YPRLTGISGR NDQADVITIQ IGIDLAKRYR PEELTPEVLT QAIMAKLPAL
AAATDGHVRP FRNQPQSNQT
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