| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4549 |
|---|
| Symbol | |
|---|
| ID | 8328747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5391796 |
|---|
| End bp | 5393868 |
|---|
| Gene Length | 2073 bp |
|---|
| Protein Length | 690 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644945003 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003102235 |
|---|
| Protein GI | 256378575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGATTGG CGCAAGCACT CGCTGCTGTG GTCGTGCTGG TCACCGCCTC GGTGACCAGC
ACGCCGGGGA TGGCCGCAGC CGCCGAGCCG TCCTCCTTGG TGGAGGACTT TGCCTACCCC
GGCGCCGCGC AGATCCTCGC CGAGCACGGC GTCAAGGTGG TGACCGGAGA CGGACGTATC
CGCTTCGCCC CGGACTGCGC CGCCTCGGCG GACCTGTTCG AGGTGTGGCA CCTCACCGAG
GCTGGTGTGG GGAGGAAGAC CTGCTTCTCA CTGAGTGGTC CGCGTGGCTT CCTCACCCTC
GAGATCCCGA GGGCCTACCT GGTCTGGGGT GGGGCGCACC GGATCGTGGT CACCTCCACC
GCCGAGGGGC GGACCACGAC GACCACGGTG GCTCCCGGTG CGGCGGAGCC GCTCGGCACA
GGTGGCGCGG TCAACACCGT GCTGGAGTTG CGCGCCAACG GCGAACCAGG CACGGCGCCG
GGTGAACCGG GACCGTTCCC CTTCGCGGTT CGGGTGGAGA CCGCAGGCCG CGCATGCGCC
GGTGCGCTGG TGGCCAGGGA GTGGGTCGCC ACCGCCACCT CCTGCTTCGG CGGCGGCACG
ATCGGTGAGG GACCGCCGCC GCGACCGTCC ACTGTCGTGG TCGGACGTTC CGATCTGGAC
CGCCTGGGCG GCCACGAGCG GGCGGTGGTG AAGCTGGTGC CGCGCAGCGA CCGGGACCTG
ACGCTGGCCA AGCTGGACCG GCCGGTCACC GAGGTCGTGC CGGTTCCGCT CGCCAGGCTG
CCGCTCACTA CCGGCCAGCC CATCCGGGGC CTGGGCTACG GCCGGAGCGC AAGCGACTGG
ACAGGTCGAC GATTGGTCGA CCGGGCCCTC GGGGTCGGGG CCGTCGCCGC CACGACGGTG
AACCTGAACG GCGACCCGCT TTGCAAGGGC GACGCGGGTG CACCGCTGCT GCGGGCTGGC
GAACTGGTCG GAGTGGCGGT TGCCTCGTCC CAGGCAGGCT GCGTGGGCGA GGCCGGTGGT
GAGCCCGCCG CGGTCGCGGC TCGCATTGAC GACCTGGCGG GCTGGGTAGT GCGAACGGTG
ACGACGCCAT CCAGGTTGGG TGCATTCTAC AACTACATCG GCAGTAGCAC CGGGTTGTGG
ATGTTCGACG ACGTCACCGG CACGGGCGGT TCCCGGTTGG CGTGGAGCAG CGGAGGAGCC
AATAGCTGGG ACTGGACCCG CACCAAGGCA GTCTCCGGCG ATTTCGACGC CGACGGACGC
AACGAGATCG TCGCCTTCTA CGACTATGGC GGAGGTCGGA CTACGGTCTT CTTCTTCGAC
GGCGTCGAGG GTGTCACCAC CCCGGTGAAG GTGTGGGAGT CACCTGCCGG GACCTGGGAG
TGGCCGAGGA TGAACCCGGT GTCAGGCGAC TTCGACGGGG ACGGTCGAGA CGAGATCGCG
GTCTTCTACG ACTACGGCTC GGGTAACACC GCCGTCTGGC TCTTCGTCGG ACTTGATCGG
ACAGCGAGTG CTCGAATGGT CTGGAACTCC GGGCTCGGTA CCTGGGAGTG GAATCGGATT
AAACCGGTGG CCAGTGACTT CGACGGGGAC GGTCGAGACG AGATCGCGGC GTTCTACGAC
TACTCCAGCG GCTCAACCGG GCTGTGGATC TTCGACGAGG TGGCGAACGC GGTGACCACC
CGGAATCCGT GGAGGACGGC GAGCGGAATG TGGGAGTGGG GGCGGACCTA CCCGGTCGCC
GCCGACTTCG ACGGGGATGG CCGTGCCGAG ATCGCCGCGT TCTACGACTA CGGCAACACC
TCGCTCGCGG TGTGGCTGTT CGACGACGTC GGTGGTACAC CGGCTGCTCG GATGACTTGG
AGCGCCAACG GATGGGAAGC CGGGAGGATG AAGCTGGCCG CCGGAGACTT CGACGCCGAC
GGGCGAGGTG ATATCGCGGT TCTCTACAAC GAGGGCAGCT CACGCACGAC CTTGCGGGCC
TTCACGAACG TCGACGGTGC GGTGAGCGTG CGCACCACCT GGGATTCCGG CATCGGCACC
TGGGAGTGGG CCCGAACCCT GGCGACCGCC TAG
|
|---|
| Protein sequence | MRLAQALAAV VVLVTASVTS TPGMAAAAEP SSLVEDFAYP GAAQILAEHG VKVVTGDGRI
RFAPDCAASA DLFEVWHLTE AGVGRKTCFS LSGPRGFLTL EIPRAYLVWG GAHRIVVTST
AEGRTTTTTV APGAAEPLGT GGAVNTVLEL RANGEPGTAP GEPGPFPFAV RVETAGRACA
GALVAREWVA TATSCFGGGT IGEGPPPRPS TVVVGRSDLD RLGGHERAVV KLVPRSDRDL
TLAKLDRPVT EVVPVPLARL PLTTGQPIRG LGYGRSASDW TGRRLVDRAL GVGAVAATTV
NLNGDPLCKG DAGAPLLRAG ELVGVAVASS QAGCVGEAGG EPAAVAARID DLAGWVVRTV
TTPSRLGAFY NYIGSSTGLW MFDDVTGTGG SRLAWSSGGA NSWDWTRTKA VSGDFDADGR
NEIVAFYDYG GGRTTVFFFD GVEGVTTPVK VWESPAGTWE WPRMNPVSGD FDGDGRDEIA
VFYDYGSGNT AVWLFVGLDR TASARMVWNS GLGTWEWNRI KPVASDFDGD GRDEIAAFYD
YSSGSTGLWI FDEVANAVTT RNPWRTASGM WEWGRTYPVA ADFDGDGRAE IAAFYDYGNT
SLAVWLFDDV GGTPAARMTW SANGWEAGRM KLAAGDFDAD GRGDIAVLYN EGSSRTTLRA
FTNVDGAVSV RTTWDSGIGT WEWARTLATA
|
|---|
| |