Gene Amir_4520 details

Gene Information

• Locus tag: Amir_4520
• ID: 8328717
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 5361505
• End bp: 5362284
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 644944977
• Product: hypothetical protein
• Protein accession: YP_003102210
• Protein GI: 256378550

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00166177
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGATCG CGCTGTCCCG GCCGGAGTTC GACCTGTGCT GGGAGCGCCT GGCGCTGGGC 
GAGCACCCGA CGGTCCTGGC GATCCCCTCG CACGGCGCCA CCGCGCGGGA GCGGGCGGCC 
GTGCTCGCCG ACGCGTGGGA CGCCCTGCGG GCGCGCGGCC TGGCCGGACG CGGCGGCCTG 
GACCCGCGCC TGGCCGGGTG GCTTGCCCTG CTGGCCCGCC CGGACCGCGA GGTCGACGCC 
AGGCTGCGCC TGGACGCCGG TCCGCGCGTC CGGGCGGTCG CGGCGGCAGG CCGAGGGCGG 
GCGGTGCTGG CCGTCCTCAC CGCCGAGCGG CTGCTCCTGG AGGAGGTCGA CGAGGACGCG 
CTGGCCGCGT CGGTGGTGGG CCTGCTGCCG CCGCACGCCA CGCCGAGGTC CCGCTCGATC 
AGCCTGCGCG CGGCGGACCT GGAGCGCGCC GCCGCCAGGG CGGACCGGTC GGCGGCGGGC 
CTGGAGCAGG CGCTGCGCGA GGTGGGCCTG CCCCGCCAGG ACGCCGGGAA GGTCGCCGAG 
GTGCTGGGGA ACGTCGTGCG CATGGGCCAG TTCGGCGCGG CGACGAGGCC CACGCGCCCG 
GACGGTCCGG GCAGGCGCGA GCGGGGCCCG TACGCGGTCT CGTTCTACGA CACCCCGGAG 
GGCCGCTGGC AGTTCACCCG CCGCCCGGAC GACACCGGGC AGCAGTGGTC GACCCTGAGC 
CCGGCGGACC ACCGCCGCCT GGCGCACGCC GTGGCCGAAC TGCTGGCGGG CGGGCGCTGA 

 

Protein sequence

MRIALSRPEF DLCWERLALG EHPTVLAIPS HGATARERAA VLADAWDALR ARGLAGRGGL 
DPRLAGWLAL LARPDREVDA RLRLDAGPRV RAVAAAGRGR AVLAVLTAER LLLEEVDEDA 
LAASVVGLLP PHATPRSRSI SLRAADLERA AARADRSAAG LEQALREVGL PRQDAGKVAE 
VLGNVVRMGQ FGAATRPTRP DGPGRRERGP YAVSFYDTPE GRWQFTRRPD DTGQQWSTLS 
PADHRRLAHA VAELLAGGR