Gene Amir_4503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4503 
Symbol 
ID8328700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5340885 
End bp5342804 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content76% 
IMG OID644944960 
Productamino acid adenylation domain protein 
Protein accessionYP_003102193 
Protein GI256378533 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGCTGC CCGGCCTCGT CCTGTCGTGG TGGGGGACTG ATGTGATCGA TCCTGGGGAA 
TGGGCCCGCG CCGGTTCGCC GTCGGCGGAG CGGGGGCTGC ACCTGCTCGT GGCCGACCGC
GTCGCCGACT GCGCCGACCG CCAGGCGCTC GTGCACGGCG ACACCTGCCT CACCTACGCG
GAGCTGGACG CCCGCGCCAA CGGCCTGGCC CACCGCCTCG TCGCGGCGGG CGTGCGCGTG
GACGACGTGG TGGGGCTGTG CGTCGACCGC TCCTTCGGCA TGGTCGTGGG GCTGCTCGCG
ATCCTCAAGG CGGGCGGGGC GTACCTGCCG CTGGACCCGG AGCTCCCACC CGCCAGGATC
GAGCGGATCA CCACCGCGGC GAGCGCCCGC GCGTGCGTGG TCTCCGACCG GCACCGGGCC
CTGCTGCCCG GCCACGTCAC CGCGCTCGCC CCCGAGGCCG AACCCGCGCC CACCCCGCCC
GACCGGCGCG CGGCGGGCCA CAACCTCGTG TCGGTCTACT TCACCTCCGG CTCCACCGGC
GTCCCCAAGG GCGTCGCGAG CAGCCACGGC GGCTGGGTCA ACCGCATGGC CTGGTCGCAG
CGCGCCCACC GGCTCGCGCC GGGGGACACC GTGCTGCACA AGACGACGCT GACGTTCGAC
GACGCCGCGC TGGAGCTGTT CTGGCCGCTG GCGGCGGGCG CGCGCGTCGC GCTGCTCGAC
CCCGGCGCGC ACCGCGACCC GATCGCCGTC CTGGACGGCC TGCACCGCCA CCGCTCGGTC
TACCTCCAGG TCGTGCCCAC CATGCTGGCC GCGCTGCTCG ACGAGATCGC CCGCGACCGC
GACCGCTGGG ACCTGTCGGC GCTGCGCGAC GTCACCTCCA GCGGCGAGGC GTTGCCCACC
ACCACCGTCC GGCGCTTCCT CGACCTGCTG CCGTCGACGC GGCTGCACAA CACCTGGGGC
GCCACCGAGG TCTCGATCGA CTCCACCAAC CACACCTGCG GCCCGGCGGA CGCCGAGGAC
ACCGGGGCCA CGTCGGTGGG CCTGCCCATG ACGGGCAACC ACGTGCGCGT CCTGGACGCC
GAGCTGCGCG AGGTCCCCCT CGGCGAGGTC GGCGACCTGC ACATCTCCGG CGTCGGCCTG
GCCAGGGGCT ACCTCGGCGA CCCGGCGGCC ACGGCGGCGG CGTTCGGCCC CGACCCGTTC
GAGCCCGGCG GGCGCCTCTA CCGCACCGGC GACCGGGGCT ACCGCCGCCC GGACGGGGCG
GTGAAGTTCG TCGGCCGCGA CGACCACCAG GTCAAGATCC GGGGGATGCG GGTCGAGCTG
GGCGAGGTGG AGGCCGCGCT GCGCCGCTCG CCGCTGGTGC GCGACGCGGC CGTCCTGCTG
CGCCGCCTCG GCGAGGCCGA CCAGCTCGTC GGCTACGTGA CGCCCGCCGA CGCCCAGGAC
CCTCCCCGGC CCGAGCCGCT GCGCGACGCG CTCGCCGACT GGCTGCCCGC GCACATGGTG
CCCTCGCGGG TCGTCGTGCT CGACGTGTTC CCGCTCAACG CCAACGGCAA GGTCGACCGC
GCCCGCCTGC CCGAGCCAAG CCTCCCGGCG GACGTGGACG GCGCGGACGA CGCGGGCTTC
ACCCCGCCCA GCGGCCCCGC CCAGGAGGCC ATCGCCGCCA TGTGGCGCGA GCTGCTGGGC
GTGCCGCGCG TCGGCGCGGA CGACGACTTC TTCGACCTCG GCGGGCACTC GCTGCTGGCC
ACCCGGTTCA CCGCGCGCGT GCGCCACCGC TTCGACGTGG AGCTCCCGGT CCGCGTCGTG
TTCGACCGGC CCGTGGTCGC CGAGCTGGCC GAGGAGGTCG AGGCCCTGCT CGCCGCCAAG
ATCCAGGACA TGTCCGACGA CCAGGTCCGG GCGCTGCTCG GCGACCGGTC CACCCGGTGA
 
Protein sequence
MPLPGLVLSW WGTDVIDPGE WARAGSPSAE RGLHLLVADR VADCADRQAL VHGDTCLTYA 
ELDARANGLA HRLVAAGVRV DDVVGLCVDR SFGMVVGLLA ILKAGGAYLP LDPELPPARI
ERITTAASAR ACVVSDRHRA LLPGHVTALA PEAEPAPTPP DRRAAGHNLV SVYFTSGSTG
VPKGVASSHG GWVNRMAWSQ RAHRLAPGDT VLHKTTLTFD DAALELFWPL AAGARVALLD
PGAHRDPIAV LDGLHRHRSV YLQVVPTMLA ALLDEIARDR DRWDLSALRD VTSSGEALPT
TTVRRFLDLL PSTRLHNTWG ATEVSIDSTN HTCGPADAED TGATSVGLPM TGNHVRVLDA
ELREVPLGEV GDLHISGVGL ARGYLGDPAA TAAAFGPDPF EPGGRLYRTG DRGYRRPDGA
VKFVGRDDHQ VKIRGMRVEL GEVEAALRRS PLVRDAAVLL RRLGEADQLV GYVTPADAQD
PPRPEPLRDA LADWLPAHMV PSRVVVLDVF PLNANGKVDR ARLPEPSLPA DVDGADDAGF
TPPSGPAQEA IAAMWRELLG VPRVGADDDF FDLGGHSLLA TRFTARVRHR FDVELPVRVV
FDRPVVAELA EEVEALLAAK IQDMSDDQVR ALLGDRSTR