Gene Amir_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4500 
Symbol 
ID8328697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5336809 
End bp5339079 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content76% 
IMG OID644944957 
ProductCysteine synthase 
Protein accessionYP_003102190 
Protein GI256378530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.632569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTCG ACGGCATCAC CGACGCGATC GGCCACACCC CGCTGGTCCG GCTGCGCGTC 
CCGGCCGCTC CCGGCGTCGA GGTCTACGCC AAGCTGGAGC TGCAGAACCT GTTCGGCATG
AAGGACCGCG TCGCGGCCAC CATCATCACC GAGGCCAGGC GCACCGGCGC GCTCGTCGAG
GGCGCGCACA TCGTGGAGAG CTCCTCGGGC ACGATGGCGC TGGGCGTCGC GCTCGTCGGC
ACCGCCCTCG GGCACCCGGT GCACATCGTC ACCGACCCGC GCGTGGACCG GATGACCCTG
GCCAAGCTGC GCGCCCTCGG CTGCGCGGTG CACGTCGTCG ACGCCATGAC CTCCCACGGC
TGGCAGAGCG CGCGCCTGGA ACGCCTGGAG CGGCTGATGG CCGAGCTGCC CGGCGCGTTC
TGGCCGCAGC AGTACAGCAA CCCCGACAAC CCGGCCGCCT ACCGCAGGCT CGCCGAGGAG
GTCCTGCGCG ACCTCGGGCA CGTCGACGTG CTCGTCGGCT CGGTCGGCAG CGGCGGATCG
CTGTGCGGGT CGTCGCGGGC GCTGCGCGAG AGCCTGCCCG GCCTGCTCGT GCTGGGCGTG
GACTGCGTGG GCAGCGCCCT GTTCGACCAG CCCGACGAGC CCAGGCGGTT GCAGAGCGGC
CTCGGCAACA GCCTGCTGCC CAAGAACCTC GACCGCACCC TCGTCGACGA GGTGCACTGG
CTCAACGACC ACGAGGCGTT CGCCGCGACC CGCGCCCTGG CCGCCGAGCA GCAGATCTTC
GCGGGCAACA CCTCCGGCTC GGTGTACCGC GTGCTCACCG ACGTCGCCGC CCGCTCCGCG
CCGGGCACCC GCGTCGTCGG CATCTTCCCC GACCGGGGCG ACCGCTACGC CGACACCGTC
TACAGCGACG AGTTCTGGGC CTCCTCCGGG CTGACCGCCC TGCCGGTGGC GAGCGCCCCG
GAACCGGTGG ACTACGGCAC GACCGTCACC GGGTGGTCCC GCGCGGCCAA CAAGTCCGGC
GCGGACGTGC AGCGCCACCT GCTGTTCGTC GAGGCCAACA CCACCGGCAC CGGCGTGCTC
GCCCTGGGCC TCGCCGGGGA GCTCGGCCTC ACCCCCGTCC TGCTCACCGG GGACCCCTCC
CGCTACGCCG GTCTCGCCGG GAGCGGCGCC GAGGTGCTGG AGTGCGACAC GAACTCCGCC
GCCGCCCTGC GCGCCGCCGT CCAGGACCGG TTCCGCCGCG AGGAGGTGGC GGGCGTGAGC
ACCACCAGCG ACTTCTACAC CCCGGCGGCG GCGGACCTGG CCGCGTGGCT GGGGCTGCCC
CGCAACCCGG TGGACGCGGT CCTCACCTGC CGCGACAAGT CGCTGCTGCG CGCGCGCCTG
ACCGGGGCCG GGGTGCGCCA GCCGGGGCAC GTGGTGCTGC GCGAGCCGGT GACCGGGGAC
GACGCGGCGC GCGCCGTCGC GGCCGTCGGG CTGCCGTGCG TGGTGAAACC GGTCGACGAC
TCCGGCTCCA ACGCCGTGCT GCTGCGCCAC GACGCCGACG AGGTCCTCGC CCACGCGCGC
CGCGTGCTCG CGGTGCGCGC GAACGTGCGC GGCCTGCCCA CCGCCCGCTC GGTCCTGGTG
GAGCAGTTCC TGCCCGGCGA GGAGTTCAGC GTCGAGCTGT TCGGCTGGGC CGGCGAGACC
CACCTGGTGG GCGTGACCCG CAAGTCCGTG ACGCCCGGCC CGCACTTCGT GGAGACCCGG
CACCTGTTCC CCGCGCCGCT GGACCCCGCG CTCGCCGACG AGGTCGTCGC CGTGGCCCGC
CGCGCCGTCG AGGCCGCAGG GATGCGCCTG GGCGCCACGC ACACCGAGGT GCGGCTCACC
GCCGACGGCC CCGCGGTCGT GGAGGTCAAC CCGCGCCTGG CGGGCGGCAT GATCCCCGAA
CTGGTCCGGC TGGCCACGGG CGTGGAGCTG CTGGCCCAGC AGGTGCGCGC CGCCGCCGGG
CTGCGCCCCG ACCTCACCCC GTCGCGCGCG GCCCACGCGG GCATCGTGTT CCTGACCGCG
CCGCGCGCCG GCGTCCTGGC CGAGGTCACC GGGGTCGAGG CCGCGCGCGC CGTGCCCGGC
GTGGAGCGGG TCCTGGTCAC CGCCGCGCCC GGCGCCGCCG TGCGCCCTCC CGAGAACGCC
TACGACCGCC TCGGCCACGT CATCGCCCTC GGCGAGACGC CCGCCGAGGT CGACGCCGCC
CTGACCGCCG CCCACGACGC CGTGGGCATC CGCATGGAGG CCGGACAGTG A
 
Protein sequence
MIFDGITDAI GHTPLVRLRV PAAPGVEVYA KLELQNLFGM KDRVAATIIT EARRTGALVE 
GAHIVESSSG TMALGVALVG TALGHPVHIV TDPRVDRMTL AKLRALGCAV HVVDAMTSHG
WQSARLERLE RLMAELPGAF WPQQYSNPDN PAAYRRLAEE VLRDLGHVDV LVGSVGSGGS
LCGSSRALRE SLPGLLVLGV DCVGSALFDQ PDEPRRLQSG LGNSLLPKNL DRTLVDEVHW
LNDHEAFAAT RALAAEQQIF AGNTSGSVYR VLTDVAARSA PGTRVVGIFP DRGDRYADTV
YSDEFWASSG LTALPVASAP EPVDYGTTVT GWSRAANKSG ADVQRHLLFV EANTTGTGVL
ALGLAGELGL TPVLLTGDPS RYAGLAGSGA EVLECDTNSA AALRAAVQDR FRREEVAGVS
TTSDFYTPAA ADLAAWLGLP RNPVDAVLTC RDKSLLRARL TGAGVRQPGH VVLREPVTGD
DAARAVAAVG LPCVVKPVDD SGSNAVLLRH DADEVLAHAR RVLAVRANVR GLPTARSVLV
EQFLPGEEFS VELFGWAGET HLVGVTRKSV TPGPHFVETR HLFPAPLDPA LADEVVAVAR
RAVEAAGMRL GATHTEVRLT ADGPAVVEVN PRLAGGMIPE LVRLATGVEL LAQQVRAAAG
LRPDLTPSRA AHAGIVFLTA PRAGVLAEVT GVEAARAVPG VERVLVTAAP GAAVRPPENA
YDRLGHVIAL GETPAEVDAA LTAAHDAVGI RMEAGQ