Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4500 |
Symbol | |
ID | 8328697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5336809 |
End bp | 5339079 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944957 |
Product | Cysteine synthase |
Protein accession | YP_003102190 |
Protein GI | 256378530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.632569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCG ACGGCATCAC CGACGCGATC GGCCACACCC CGCTGGTCCG GCTGCGCGTC CCGGCCGCTC CCGGCGTCGA GGTCTACGCC AAGCTGGAGC TGCAGAACCT GTTCGGCATG AAGGACCGCG TCGCGGCCAC CATCATCACC GAGGCCAGGC GCACCGGCGC GCTCGTCGAG GGCGCGCACA TCGTGGAGAG CTCCTCGGGC ACGATGGCGC TGGGCGTCGC GCTCGTCGGC ACCGCCCTCG GGCACCCGGT GCACATCGTC ACCGACCCGC GCGTGGACCG GATGACCCTG GCCAAGCTGC GCGCCCTCGG CTGCGCGGTG CACGTCGTCG ACGCCATGAC CTCCCACGGC TGGCAGAGCG CGCGCCTGGA ACGCCTGGAG CGGCTGATGG CCGAGCTGCC CGGCGCGTTC TGGCCGCAGC AGTACAGCAA CCCCGACAAC CCGGCCGCCT ACCGCAGGCT CGCCGAGGAG GTCCTGCGCG ACCTCGGGCA CGTCGACGTG CTCGTCGGCT CGGTCGGCAG CGGCGGATCG CTGTGCGGGT CGTCGCGGGC GCTGCGCGAG AGCCTGCCCG GCCTGCTCGT GCTGGGCGTG GACTGCGTGG GCAGCGCCCT GTTCGACCAG CCCGACGAGC CCAGGCGGTT GCAGAGCGGC CTCGGCAACA GCCTGCTGCC CAAGAACCTC GACCGCACCC TCGTCGACGA GGTGCACTGG CTCAACGACC ACGAGGCGTT CGCCGCGACC CGCGCCCTGG CCGCCGAGCA GCAGATCTTC GCGGGCAACA CCTCCGGCTC GGTGTACCGC GTGCTCACCG ACGTCGCCGC CCGCTCCGCG CCGGGCACCC GCGTCGTCGG CATCTTCCCC GACCGGGGCG ACCGCTACGC CGACACCGTC TACAGCGACG AGTTCTGGGC CTCCTCCGGG CTGACCGCCC TGCCGGTGGC GAGCGCCCCG GAACCGGTGG ACTACGGCAC GACCGTCACC GGGTGGTCCC GCGCGGCCAA CAAGTCCGGC GCGGACGTGC AGCGCCACCT GCTGTTCGTC GAGGCCAACA CCACCGGCAC CGGCGTGCTC GCCCTGGGCC TCGCCGGGGA GCTCGGCCTC ACCCCCGTCC TGCTCACCGG GGACCCCTCC CGCTACGCCG GTCTCGCCGG GAGCGGCGCC GAGGTGCTGG AGTGCGACAC GAACTCCGCC GCCGCCCTGC GCGCCGCCGT CCAGGACCGG TTCCGCCGCG AGGAGGTGGC GGGCGTGAGC ACCACCAGCG ACTTCTACAC CCCGGCGGCG GCGGACCTGG CCGCGTGGCT GGGGCTGCCC CGCAACCCGG TGGACGCGGT CCTCACCTGC CGCGACAAGT CGCTGCTGCG CGCGCGCCTG ACCGGGGCCG GGGTGCGCCA GCCGGGGCAC GTGGTGCTGC GCGAGCCGGT GACCGGGGAC GACGCGGCGC GCGCCGTCGC GGCCGTCGGG CTGCCGTGCG TGGTGAAACC GGTCGACGAC TCCGGCTCCA ACGCCGTGCT GCTGCGCCAC GACGCCGACG AGGTCCTCGC CCACGCGCGC CGCGTGCTCG CGGTGCGCGC GAACGTGCGC GGCCTGCCCA CCGCCCGCTC GGTCCTGGTG GAGCAGTTCC TGCCCGGCGA GGAGTTCAGC GTCGAGCTGT TCGGCTGGGC CGGCGAGACC CACCTGGTGG GCGTGACCCG CAAGTCCGTG ACGCCCGGCC CGCACTTCGT GGAGACCCGG CACCTGTTCC CCGCGCCGCT GGACCCCGCG CTCGCCGACG AGGTCGTCGC CGTGGCCCGC CGCGCCGTCG AGGCCGCAGG GATGCGCCTG GGCGCCACGC ACACCGAGGT GCGGCTCACC GCCGACGGCC CCGCGGTCGT GGAGGTCAAC CCGCGCCTGG CGGGCGGCAT GATCCCCGAA CTGGTCCGGC TGGCCACGGG CGTGGAGCTG CTGGCCCAGC AGGTGCGCGC CGCCGCCGGG CTGCGCCCCG ACCTCACCCC GTCGCGCGCG GCCCACGCGG GCATCGTGTT CCTGACCGCG CCGCGCGCCG GCGTCCTGGC CGAGGTCACC GGGGTCGAGG CCGCGCGCGC CGTGCCCGGC GTGGAGCGGG TCCTGGTCAC CGCCGCGCCC GGCGCCGCCG TGCGCCCTCC CGAGAACGCC TACGACCGCC TCGGCCACGT CATCGCCCTC GGCGAGACGC CCGCCGAGGT CGACGCCGCC CTGACCGCCG CCCACGACGC CGTGGGCATC CGCATGGAGG CCGGACAGTG A
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Protein sequence | MIFDGITDAI GHTPLVRLRV PAAPGVEVYA KLELQNLFGM KDRVAATIIT EARRTGALVE GAHIVESSSG TMALGVALVG TALGHPVHIV TDPRVDRMTL AKLRALGCAV HVVDAMTSHG WQSARLERLE RLMAELPGAF WPQQYSNPDN PAAYRRLAEE VLRDLGHVDV LVGSVGSGGS LCGSSRALRE SLPGLLVLGV DCVGSALFDQ PDEPRRLQSG LGNSLLPKNL DRTLVDEVHW LNDHEAFAAT RALAAEQQIF AGNTSGSVYR VLTDVAARSA PGTRVVGIFP DRGDRYADTV YSDEFWASSG LTALPVASAP EPVDYGTTVT GWSRAANKSG ADVQRHLLFV EANTTGTGVL ALGLAGELGL TPVLLTGDPS RYAGLAGSGA EVLECDTNSA AALRAAVQDR FRREEVAGVS TTSDFYTPAA ADLAAWLGLP RNPVDAVLTC RDKSLLRARL TGAGVRQPGH VVLREPVTGD DAARAVAAVG LPCVVKPVDD SGSNAVLLRH DADEVLAHAR RVLAVRANVR GLPTARSVLV EQFLPGEEFS VELFGWAGET HLVGVTRKSV TPGPHFVETR HLFPAPLDPA LADEVVAVAR RAVEAAGMRL GATHTEVRLT ADGPAVVEVN PRLAGGMIPE LVRLATGVEL LAQQVRAAAG LRPDLTPSRA AHAGIVFLTA PRAGVLAEVT GVEAARAVPG VERVLVTAAP GAAVRPPENA YDRLGHVIAL GETPAEVDAA LTAAHDAVGI RMEAGQ
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