Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4499 |
Symbol | |
ID | 8328696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5335766 |
End bp | 5336812 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644944956 |
Product | Threonine aldolase |
Protein accession | YP_003102189 |
Protein GI | 256378529 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2008] Threonine aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGAGC TGCGCAGCGA CACGTTCACC CTGCCCACGC CCCGGATGCG CGAGGCGATG GCGTCCGCCC CGCTCGGGGA CGACGTGTAC GGCGAGGACC CGACCGTGCG CGAGCTGGAG GAGCTGGCCG CGCACGTCTG CGGCAAGCAG GCCGCGTGCC TGATGCCCAG CGGCACGATG GCCAACCTGG CCGCGGTGCT GGCCCACGCC GGGCGCGGCG AGAAGGTCCT GGTCGGCGAC GAGAGCGACC TGCACGTCTA CGAGGCGGCG GGCCCTTCGG TGCTCGGCGG CGTCGCGGTG GAGCCGGTGC CCACCCGGCC CGACGGCACG CTCGCGCTGG ACGACCTCGC CAGGGGCTTC CCCGACGACC CGGACGACCC GCAGTTCGCC CTGCCCGCCC TGCTGTGCCT GGAGAACACG CACAACCGGT GCGGCGGGAA GGTCCTGCCC CCGGACTACC CGGCGGCCGT GCGGCGCTTC GCCGACGAGC GGGGCGTCGC CGTGCACCTG GACGGGGCGC GGGTGTTCAA CGCCTCCGTC GCCTCCGGCG TGCCCGTCGC GGACCTCGCC GCGCACGCCG ACTCGCTCCA GTTCTGCCTG TCCAAGGGCC TCGGCGCGCC CATCGGGTCC ATCACGGCGG GCAGTGCCGC GTTCATCACC AAAGTGCGCA GGCTGCGCAA GCTGCTGGGC GGGGGGATGC GCCAGGCCGG GGTGATCGCC GCCGCCGGGA TCGTCGCCAT CGAGGAGGCC GGGCGGCTGG CCGTCGACCA CGAGCACGCC AGGCTCCTCG CGAAGGGGCT GGCCGGGATC GACGGCGTGG AGCTGGCCGA CCCCGACGTG CCCACCAACA TGGTGTTCTT CCGCGTCACC GACGAGCGGT TCACCCACCG GGCGTTCGTC GACTCGGCCG CCGCCAAGGG GGTCGCCCTC GCCGAGCTGG GGCACGGCCG CATCCGCGCG GTCACCCACT CCGGCGTCAC CCGCGCCGAC GTGGAGAACG CCGTCGCCGT CGTCGCCGAC GTGCTGCGCG AGGGGCCCCG GTCGTGA
|
Protein sequence | MIELRSDTFT LPTPRMREAM ASAPLGDDVY GEDPTVRELE ELAAHVCGKQ AACLMPSGTM ANLAAVLAHA GRGEKVLVGD ESDLHVYEAA GPSVLGGVAV EPVPTRPDGT LALDDLARGF PDDPDDPQFA LPALLCLENT HNRCGGKVLP PDYPAAVRRF ADERGVAVHL DGARVFNASV ASGVPVADLA AHADSLQFCL SKGLGAPIGS ITAGSAAFIT KVRRLRKLLG GGMRQAGVIA AAGIVAIEEA GRLAVDHEHA RLLAKGLAGI DGVELADPDV PTNMVFFRVT DERFTHRAFV DSAAAKGVAL AELGHGRIRA VTHSGVTRAD VENAVAVVAD VLREGPRS
|
| |