Gene Amir_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4488 
Symbol 
ID8328685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5317992 
End bp5319260 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content74% 
IMG OID644944945 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_003102178 
Protein GI256378518 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGCGG TAGTGCAGGG GGCGGACGCG CCGCGCGACG TGGTCGGGGT CGGGTTCGGC 
CCGTCGAACC TGGCGCTCGC GGTGGCGCTG GCGGAGCGGG ACGGGCCGTC CTCGGCGTTC
TTCGAGCGCC AGCCGCGCTT CGGCTGGCAC CGGGGGATGC TGCTCGACGG AGCGACGATG
CAGGTGTCGT TCCTCAAGGA CCTGGTGTCG ATGCGCAACC CGACCTCGCC GTACAGCTTC
GTGTCCTACC TGCACGCCAG GGGCAGGATG CCGGAGTTCG TCAACGCCAA GACGCTGTAC
CCGCTGCGGG TGGAGTTCCA CGACTACCTG GAGTGGGTGG CCGGGCACTT CGCGGGCTCG
GTGTCCTACG GCAGCGAGAT CACCGCGCTG GAGCCGGTCG CCGAGGACGG CGTGGTCGGG
CACCTGGACG TGGTGGCGCG CCGCGACGGG CGGACCACGA CCACGCGGGC CCGCAACGTG
GTCGTCGCCA CCGGCCTGGA GCCCCGGCTG CCCGACGGAG TGACCGGGGG CGAGCGGGTG
TGGCACAGCG GCGAGCTGCT GCACCGGGTG CCCTGGCTGC GGGAGCGGCG GGTGCGCAAG
GTGGCGGTGG TCGGCGCGGG GCAGAGCGCC GCCGAGGTCA CCGAGTACCT GCACCGGACG
CTGCCGGGCG CGGAGGTCAT CGCGGTGTTC TCCCGCTTCG GCTACAGCGT CGCCGACGAC
ACCCCGTTCG TGAACGAGGT GTTCGACCCG GACTCGGTGG ACCTGTTCTA CGGCTCGCCG
CCGTCGGTCA GGCAGGCGCT GCTGGCCCAC CACGGGAACA CGAACTACTC GGTGGTCGAC
GCCGACCTGT CGCTGGAGCT GTACCGGCGG CGCTACCAGG AGCGGGTCAC CGGCTCGTCG
CGGCTGCGCG TGGTCAACGT CTCGCGGGTG CGCTCGGTGC GCGAGCGGCC CGACGGGGTG
GCGCTGCAGG TCGAGTACCT GCCGACGGGA GTGGTGGGCA CGCTCGCGGC CGACGCCGTG
GTCTGCGCCA CCGGCTACCG GCCCGCCGAC CCGACGCCGC TGCTGCGGGG CCTGGCGAAG
CTGGACGGGG CGGGCAGGCC GGTGCTGGAC CGGGACCACC GGGTCGTCAC CTCCGGCTCG
GTGCGCGCCG GGATCTACCT GCAGGGCGCG GTGACCGAGC CGACGCACGG GCTGTCCGCG
GGCCTGCTGT CCACCACCGC CGTCCGGGCG GGCGAGATCG TCCGGGCGAT CCTCGACGAG
GGCAGGTAG
 
Protein sequence
MTAVVQGADA PRDVVGVGFG PSNLALAVAL AERDGPSSAF FERQPRFGWH RGMLLDGATM 
QVSFLKDLVS MRNPTSPYSF VSYLHARGRM PEFVNAKTLY PLRVEFHDYL EWVAGHFAGS
VSYGSEITAL EPVAEDGVVG HLDVVARRDG RTTTTRARNV VVATGLEPRL PDGVTGGERV
WHSGELLHRV PWLRERRVRK VAVVGAGQSA AEVTEYLHRT LPGAEVIAVF SRFGYSVADD
TPFVNEVFDP DSVDLFYGSP PSVRQALLAH HGNTNYSVVD ADLSLELYRR RYQERVTGSS
RLRVVNVSRV RSVRERPDGV ALQVEYLPTG VVGTLAADAV VCATGYRPAD PTPLLRGLAK
LDGAGRPVLD RDHRVVTSGS VRAGIYLQGA VTEPTHGLSA GLLSTTAVRA GEIVRAILDE
GR