Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4473 |
Symbol | |
ID | 8328670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 5297612 |
End bp | 5298289 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944932 |
Product | nitroreductase |
Protein accession | YP_003102165 |
Protein GI | 256378505 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACCA CCCTCCCCGC CCTCGCCGAC CGCCTGATCC GGGGACGCCG CGCCACCAGG GCGTTCCTGC CCGACCCGCT GCCGAGGGAG ACCCTGGAGG CCGTGTTCAC CCTGGCGGGC GCCGCGCCGT CGAACTCCAA CGCGCAGCCG TGGCAGGTCG AGGTCGTCAG CGGCGCGGCC AAGGACCGGC TCGCCTCCGC GCTCGTCGCC GCGCACGCCG CCGGTCACCG CAGCGTCGAC TTCCCCTACA GCCACGACGT CTACTCCCCC ACCCACCTGC GCAGGCGCGC GGAGGCGGGC GCGGCGCTGT ACGGGGCGCT CGGCATCGGC CGGGAGGCGG AGGCGCGGCG GGCCGAGTAC GACGAGCGCA GCCTGCGGTT CTACGAGGCC CCGCACGTGG CGCTGCTGTT CGCCCCCGAC TCCGGCGACC CCAGGCTCAC CGCCGACGTC GGCATGTACG CCCAGACCCT GCTGCTGGCC ATGGAGGCGC ACGGCGTGGC GAGCTGCCCG CAGGCGCTGC TGAGCTTCTA CGCCGACGTG GTGCGCGAGA CCCTCGGCGT CACCGGGGGG AAGCTGCTGT TCGGCGTCGC GTTCGGGCAC GCCGACCCGA CGGCGCCGGT GAACGCGATC ACCGTGGGCC GCGCGCCGCT GGACGAGACC ACCCGGTTCC ACCGCTGA
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Protein sequence | MPTTLPALAD RLIRGRRATR AFLPDPLPRE TLEAVFTLAG AAPSNSNAQP WQVEVVSGAA KDRLASALVA AHAAGHRSVD FPYSHDVYSP THLRRRAEAG AALYGALGIG REAEARRAEY DERSLRFYEA PHVALLFAPD SGDPRLTADV GMYAQTLLLA MEAHGVASCP QALLSFYADV VRETLGVTGG KLLFGVAFGH ADPTAPVNAI TVGRAPLDET TRFHR
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