Gene Amir_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4466 
Symbol 
ID8328663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5292246 
End bp5292860 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID644944925 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102158 
Protein GI256378498 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.575375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTCCG CCGATCGACG CTTGGAGCCA CGTCGCAAGC CCCGCCAGGC GCGCGCCGAG 
CTGACCCGCG AGCGCATCCT CACCGCCGCT GCTCACGTTT TCACCGAGCA CGGGTACGCG 
GCGGGCACCA CGAACCGCAT CGCCGAGCGG GCGCGCGTGT CGATCGGGTC GCTGTACCAG 
TACTTCCCGA ACAAGGACTC GATCCTGGCC GCGCTGCTGA TCCAGCACGT GGACCGGGGC 
GGCTGGCCGG GGTTCGAGGA GCTGGACCTG GCGCCGGGGA CGCTGGGGGC GCTGGTGCGG 
GCGCTGGTGC GCGACGCGGT CGACCACCAC CGCGACGACC CCCGGCTGCT GCGGCTGATG 
ATCGAGGAGG CGGCGGCGTC GCAGGACCTG CTGGACGCGG TGCGGCGGCA CGGGGAGCTG 
CGGACCGGGC AGGTGCGCGA GGTGCTGGAG CGGCACCCGG ACGTGCGGGT GGGCGATCCG 
GGCCTGGCGG CGGACCTGGT GCTGTTCACG GTGGAGATGA ACACCCACAA GTTCATGGCC 
GCGCCGGGGG GCACGGCGGT GGAGGTGTTC GAGGAGGAGC TGGTGGCGAT GGTGACGCGG 
TACCTGCGGG GGTGA
 
Protein sequence
MPSADRRLEP RRKPRQARAE LTRERILTAA AHVFTEHGYA AGTTNRIAER ARVSIGSLYQ 
YFPNKDSILA ALLIQHVDRG GWPGFEELDL APGTLGALVR ALVRDAVDHH RDDPRLLRLM 
IEEAAASQDL LDAVRRHGEL RTGQVREVLE RHPDVRVGDP GLAADLVLFT VEMNTHKFMA 
APGGTAVEVF EEELVAMVTR YLRG