| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4459 |
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| Symbol | |
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| ID | 8328656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5285392 |
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| End bp | 5286303 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644944918 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003102151 |
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| Protein GI | 256378491 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA CCACCCTCAC CGGCAAGCTC GCCGTCGTCA CCGGCGCGAG CGACGGCATC
GGACTCGGCC TCGCCCGCAG GCTCGCGGCG CTGGGCGCGG AGGTCGTCAT CCCGGTGCGC
GACGCGGCGA AGGGCCGCGC CGCGCTGGAG AAGATCGGCG GCGCCTCCTC CACCCGCGTG
CTCGACCTCG CGTCACTGGC CTCCGTCGCC GACCTCGCCG ACCGGCTCAC CGCCGAGGGC
CGCCCGATCG ACCTCCTGGT CAACAACGCC GCCGTCATGA CCCCGCCCAC CCGGCACACC
ACGGCGGACG GCTTCGAGCT CCAGTTCGGC ACCAACTACC TCGGCCACTT CGCCCTCGTC
GCCCGCCTCC TGCCGCTGCT CGTCGCCGCC CGCGCCCGCG TCACCACCCA GGTCTCCCTC
GGCTCCATGG CGGGCCGCGT CAACTGGGAC GACCTCCAGT CCGAGCGCGC CTACTCGCCG
TGGGGCGCCT ACAACCAGTC CAAGCTCGCG ACCAAGCTGT TCGCCCTGGA GCTGGACCGG
CGCAGCCGCG CGCACGGCTG GGGCATCACC AGCAACACCG CCCACCCCGG CTTCACCGCC
ACGAACCTGC AGAAGGCGGG CCCCACGATG GGCGGCGCGC GCTCGGCGTT CGACGCCCCG
TTCCGGGTGC TGTCCCGGCT CGGCTGGCCG GTGCAGACCG TCGAGGGCGG CCTGCGGCCC
GCGCTGCACG CCGCCACGTC GCCGGACGCG CTCGGCGGGC GCTTCTACGG CCCGCGCGGC
CTGTTCCACC TGACCGGCGC GGCCACCGAG GAGAGGGTCT ACCGGCGGGC GCGCAGCGAG
TCCGACGCCG CCCGGCTGTG GGACCTCTCG CTCGACCTGG CCGACGTGGC GTTCGCGGCT
CGGGGACACT GA
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| Protein sequence | MSETTLTGKL AVVTGASDGI GLGLARRLAA LGAEVVIPVR DAAKGRAALE KIGGASSTRV
LDLASLASVA DLADRLTAEG RPIDLLVNNA AVMTPPTRHT TADGFELQFG TNYLGHFALV
ARLLPLLVAA RARVTTQVSL GSMAGRVNWD DLQSERAYSP WGAYNQSKLA TKLFALELDR
RSRAHGWGIT SNTAHPGFTA TNLQKAGPTM GGARSAFDAP FRVLSRLGWP VQTVEGGLRP
ALHAATSPDA LGGRFYGPRG LFHLTGAATE ERVYRRARSE SDAARLWDLS LDLADVAFAA
RGH
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