| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4458 |
|---|
| Symbol | |
|---|
| ID | 8328655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 5284569 |
|---|
| End bp | 5285387 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644944917 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003102150 |
|---|
| Protein GI | 256378490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAACC GGGTCGAGCT GGCCGACTTC CTGCGGGCCA GGCGCGAGGC GCTGCAACCG
GAGGACGTCG GCCTGCCCAG GGGGCCGCGC AGGCGCACCG GCGGGCTGCG GCGCGAGGAG
GTGGCCGCGC TCAGCGGCAT CTCGGCCGAC TACTACAGCC GGATCGAGCA GCAGCGCGGC
CCGCAGCCGT CCGAGCAGGT GCTCGCCGGG ATCGCGCGCG GGCTGCACCT GTCGCTGGAC
GAGCGCGACC ACCTGTTCCG CGTCGGCGGC CACCCCGCGC CGCAGCGGCA CCCGCGCGGC
GACCACATCA GCCCCGGCAC GATGCGCATC CTGGACCGCC TCGCCGACAC CCCCGCCCAG
GTGATCAACC GGGTGGGCGA GACGCTCGCC CAGACCCGGC CCGCCATCGC GCTGATGGGG
GACGACACGC GGTGGACCGG GTTGGCGCGC AGCGCGGTCT ACCGGTGGTT CACCGACCCG
GCGAGCCGGG CGGTTCACCC GGAGGAGGAC CACGCGCTGC ACAGCCGGGT GTACGCGGCG
CAGTTCCGGC AGGCGTGCGG CGCCGGGGTT CCCAGGGCGC TGGAGATCCG GGAGGCGCTG
CTGGCGCGGA GCCCGGAGTT CGCGCGGGTG TGGGCCGAGC ACCGGGTGGG GGAGGGGTAT
CCGGGGGTGA AGCGGTTCGC GCACCGCGAG CTGGGGCTGC TGGAGCTGCG GTGCCAGACC
CTGGTGGACC CGGAGCAGGC GCAGACGCTG CTGGTGTTCA CCGCCGAGCC GGGCAGCGAG
AGCCACGAGA AGCTGCTGCT CCTGGCGGCG GTGGGGTGA
|
|---|
| Protein sequence | MRNRVELADF LRARREALQP EDVGLPRGPR RRTGGLRREE VAALSGISAD YYSRIEQQRG
PQPSEQVLAG IARGLHLSLD ERDHLFRVGG HPAPQRHPRG DHISPGTMRI LDRLADTPAQ
VINRVGETLA QTRPAIALMG DDTRWTGLAR SAVYRWFTDP ASRAVHPEED HALHSRVYAA
QFRQACGAGV PRALEIREAL LARSPEFARV WAEHRVGEGY PGVKRFAHRE LGLLELRCQT
LVDPEQAQTL LVFTAEPGSE SHEKLLLLAA VG
|
|---|
| |