Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4456 |
Symbol | |
ID | 8328653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5282988 |
End bp | 5283743 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644944915 |
Product | protein of unknown function DUF81 |
Protein accession | YP_003102148 |
Protein GI | 256378488 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAGCTGT GGGAGGCGTT CGCCCTGTTC GGCGGCGGCC TGGTCGCGGG CGGGATCAAC GCGATCGCGG GCGGCGGCTC GCTGATCACG TTCCCGCTGC TGGTGGCCAT GGGTCTGCCG GGCGTCGCGG CGAACGTCAC GAACGCCCTC TCGGTGGCCC CCGGCTACGC CTCCAGCGCC GTGGCGAGCC GCCCCGACCT GGTCGGCCAG GGCAGGCGGA TGCTGGCGGT GGTGCCGACG ATCGTCGTGG GCGCCCTGTG CGGCAGCTCC CTGCTGCTGT TCACCCCGCG CTCCGTCTTC GAGGCCGTCG TGCCGTTCCT GGTGCTGACG GCGGCGATGA TGATGGCGTT CCAGAAGCGC CTGAAAGCCC TCGCGGGCAG CCCGAAGGAC AACACCCCGC GCAAAACCGC GATCCAGCTG CAGGTGGTGT TCTTCCTGTG CGGTGTTTAC GGCGGTTACT TCAACGCGGG CATGGGCGTG CTCGCGCTGG CCGCGGTCTC GCTCGTGCTG GACGAGCCGC TGCGCAGGAT CAGCGCGCTG CGCAACGTGT TCGCCGCGGT CGTCGGCATC ACGACGGTCC TGCTGTACAG CGCCTTCGGC CCGGTGGACT GGCTGTCCGT CGCGGTCCTG GCCCCGGCGA CCGTCATCGG CGGCTACACG GGCGCCCGGA TCGCGCGCAA GCTCCCGCAG GAGGTGCTGC GGTGGACCAT CGTGGTGTTC GCGACGGGCG TGGCGATCGC GCTGTACCTG ACCTGA
|
Protein sequence | MQLWEAFALF GGGLVAGGIN AIAGGGSLIT FPLLVAMGLP GVAANVTNAL SVAPGYASSA VASRPDLVGQ GRRMLAVVPT IVVGALCGSS LLLFTPRSVF EAVVPFLVLT AAMMMAFQKR LKALAGSPKD NTPRKTAIQL QVVFFLCGVY GGYFNAGMGV LALAAVSLVL DEPLRRISAL RNVFAAVVGI TTVLLYSAFG PVDWLSVAVL APATVIGGYT GARIARKLPQ EVLRWTIVVF ATGVAIALYL T
|
| |