Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_4439 |
Symbol | |
ID | 8328636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 5233180 |
End bp | 5234094 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644944898 |
Product | periplasmic solute binding protein |
Protein accession | YP_003102131 |
Protein GI | 256378471 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.977167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCAAC TTCCCCGAGT GGTGGGCGCG ATCACCTCGA TCGCGCTGCT GACCGCGGCC TGCGGCGCCG CGGGCGGCGC GACCTCGGAC GGCAGGCCCG TGGTGCTGAC GACCTTCACC GTGCTCGCCG ACATCGCGGC CAACGTCGCG GGCGGGCGCC TCCGGGTCGA GTCGATCACC CGGCCCGGCG TCGAGGTCCA CGGCTACGAG CCGACCCCGG CCGACGTCAA GAAGGCGGCG CGGGCGGACC TGGTGGTGGA CAACGGACTT GGCCTCGAAG CGTGGGCCGC CAAGTACACC GAGGACGCGG GCGCGCCGCG CGTGGTCGCC AGCGCGGGCG TCACCCCCAT CCCGATCAGC GAGGACGCGC GGGCAGGCGA GCCGAACCCG CACGCCTGGA TGTCCCCGCT CACCACCCGC GCCTACGTCG ACAACCTCGT GGCGGCGTTC AGCGACCTCG CCCCCGAGCA CGCCGGGCAC TTCCGCGCCA ACGGCGAGCG CTACCGCGCC GAGCTGCTGC GGGCGCACGA GGACCTGGTG TCCGCGCTGC GCGCCGTGCC CGATGACCGC CGCTCCCTGG TCACCTGCGA GGGCGCTTTC CCCTACCTGG CCCGCGACGC CGGCCTGACC GACCACTACC TGTGGGCGGT CAACGCCGAG CGGCAGGCCA CCCCGCGCCA GGTCGCCCGC GTCGTCGACC ACGTGCGGGC CGCCGGGGTG CCCGCCGTGT TCTGCGAGTC CACCGTCTCC GACGCCCCCA TGCGCCAGGT CGCCGCCGCG ACCGGGGCCG CGTTCGGCGG CGTGCTCCAC GTGGACTCGC TCTCCGAGCC CGACGGCCCC GTGCCCACCT ACCTCGACCT GATCCGGCAC GACGCGCGCA CCATCGCCGC CGCCCTCACC GGGGGCGCGC GGTGA
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Protein sequence | MPQLPRVVGA ITSIALLTAA CGAAGGATSD GRPVVLTTFT VLADIAANVA GGRLRVESIT RPGVEVHGYE PTPADVKKAA RADLVVDNGL GLEAWAAKYT EDAGAPRVVA SAGVTPIPIS EDARAGEPNP HAWMSPLTTR AYVDNLVAAF SDLAPEHAGH FRANGERYRA ELLRAHEDLV SALRAVPDDR RSLVTCEGAF PYLARDAGLT DHYLWAVNAE RQATPRQVAR VVDHVRAAGV PAVFCESTVS DAPMRQVAAA TGAAFGGVLH VDSLSEPDGP VPTYLDLIRH DARTIAAALT GGAR
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