Gene Amir_4420 details

Gene Information

• Locus tag: Amir_4420
• ID: 8328617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 5215696
• End bp: 5216241
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 644944880
• Product: uncharacterized peroxidase-related enzyme
• Protein accession: YP_003102113
• Protein GI: 256378453
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain; [TIGR01926] uncharacterized peroxidase-related enzyme

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.286086
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGTG TGAAGCTGAT CGACGCCCAG ACCGCGACCG GCGAGGCCAA GCCGCTGCTG 
GACCAGGTGA CCGGCGCGTT CGGCGTGACG CCCGCGATGT TCAAGGCCGT CGCGAACTCC 
CCCGCCGCGC TGAAGATGAT GTGGGCCGGT TTCGGCGCCC TCGGCGAGGG CAAGCTCGGC 
GCGCGGCTGG GCGAGCAGAT CGCCGTCCTG GTCGCCGACC GCAACGCCTG CGAGTACTGC 
CTGGCCGCGC ACACCGCGCT CGGCCGCAAG GCCGGGGTGT CCTCCGAGGA CATGCGCCAG 
GCCCAGGCCG GGCACTCGCA CGACCCGCGC ACCAGGGCGG CGCTGGAGTT CAGCGAGAAG 
CTGGTGCGCG AGCGCGCCCA GGTCACCGAC GCGGACGTGG ACGCGCTGCG GGCGGTGGGC 
TTCGACGACG AGGCGATCGT GGAGCTGATC GCGCACGTGG CGCTGAACCT GTTCACCAAC 
TACGTCAACG TCGCCCTGGG CGTGCCGGTG GACTTCCCGA AGGTCGTGCT GCGCAAGGCG 
GTGTGA 

 

Protein sequence

MSRVKLIDAQ TATGEAKPLL DQVTGAFGVT PAMFKAVANS PAALKMMWAG FGALGEGKLG 
ARLGEQIAVL VADRNACEYC LAAHTALGRK AGVSSEDMRQ AQAGHSHDPR TRAALEFSEK 
LVRERAQVTD ADVDALRAVG FDDEAIVELI AHVALNLFTN YVNVALGVPV DFPKVVLRKA 
V