Gene Amir_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4399 
Symbol 
ID8328596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5196187 
End bp5196789 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content76% 
IMG OID644944861 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102094 
Protein GI256378434 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACCG GGCGCAGGAC GGGACGACCG AGGGGCTTCG ACGCGGACGA GGCCCTGGAC 
CGGGCCGTCC GGGTGTTCTG GGCCAAGGGC TACGAGGGCG CCTCGCTCAC CGACCTGACC 
ACGGCCATGG GCATCAACCG GACCAGCATG TACGCGGCGT TCGGCAACAA GGACGAGCTG 
TTCCGCAAGG CGCTCGACCG GTACACCGGG ACGCAGGCCG GGTACGTGCG GCGGGCGCTG 
GAGGAGTCGA CCTCGGAAGC CGTGGCCAGG GCGTTCCTGG AGGGCTCGGT GCGCGCCTCC 
ACGACGCCCG GCGAGCCGAC GGGGTGCCTC GGCGTGCAGG GGGCGCTGGC GGTGGGCGAC 
GACGCGCGGC AGGCGTGCGA GGTGCTGGCG GCGTGGCGCG ACGAGGGCTG CGAGTGGCTG 
CGGAGGCGGT TCGAGCGGGC GGCGGCCGAG GGCGACCTGC CCGCCGGGAG CGACCCGGCG 
CTGCTCGCGC GGTACCTGAT GACGGTGGCG AACGGGATCG CCGTGCAGGC GTCGGGCGGG 
GCGGACCGGG AGACCCTGGA ACTGGTGGCG GGCGCGGCGC TGCGCAACTG GCCGCCCGCC 
TGA
 
Protein sequence
MDTGRRTGRP RGFDADEALD RAVRVFWAKG YEGASLTDLT TAMGINRTSM YAAFGNKDEL 
FRKALDRYTG TQAGYVRRAL EESTSEAVAR AFLEGSVRAS TTPGEPTGCL GVQGALAVGD 
DARQACEVLA AWRDEGCEWL RRRFERAAAE GDLPAGSDPA LLARYLMTVA NGIAVQASGG 
ADRETLELVA GAALRNWPPA