Gene Amir_4395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4395 
Symbol 
ID8328592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp5193446 
End bp5194036 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID644944857 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102090 
Protein GI256378430 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.724029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCA AGAGGGGCGA CCAGGGCACG CGCACCGCGC TGCTGGAGGC CGCGCAGCGG 
ATCTTCGCGA AGAAGGGCTA CGCGGCGGTC GGCATCAACG AGGTGCTGAC CAGTGTCGGC 
GTGCCGAAGG GGTCCTTCTA CCACTACTTC GCGTCGAAGG ACGCCTTCGG CGAGGCGGTC 
GTGCGGCGGT ACTTCGAGGA GTACCTGGCC GATCTCGACC GCCTCCTCGC GGGCGACGGC 
GACTGGGCGT CCCGGCTCGA CGCCTACTGG GCGGGCTGGC GGGAGACCCA GGCGCTGGAC 
GACTGCCAGG GCCGGTGCCT GTCGGTCAAG CTCGGCGCGG AGGTCGCCGA CCTGTCCGAG 
CCGATGCGGC TCGCGCTCAA GGACGGCACC ACCGCCGTGG TCGACCGCCT GGAGCGGGCC 
GTCGCGGCGG GCAGCGCGGA GGGCTCGCTC ACCTCGGCGG GCCCGGCCCG CGCCACCGCG 
CAGTCGCTGT ACTCGCTGTG GCTGGGGGCG AGCGTGCTGG CCAAGCTGCA CCGCACCCTC 
GCCCCGCTGG ACGACGCCCT CGCCACGACC CGCCTGCTGC TCGGGCGTTG A
 
Protein sequence
MASKRGDQGT RTALLEAAQR IFAKKGYAAV GINEVLTSVG VPKGSFYHYF ASKDAFGEAV 
VRRYFEEYLA DLDRLLAGDG DWASRLDAYW AGWRETQALD DCQGRCLSVK LGAEVADLSE 
PMRLALKDGT TAVVDRLERA VAAGSAEGSL TSAGPARATA QSLYSLWLGA SVLAKLHRTL 
APLDDALATT RLLLGR